From fd594ba02f48383a3950445c601a73642ac3b062 Mon Sep 17 00:00:00 2001
From: Sebastian Deorowicz <sebastian.deorowicz@polsl.pl>
Date: Fri, 28 Jun 2024 12:25:51 +0200
Subject: [PATCH] Support for smallcaps

---
 src/defs.h          |  8 ++++----
 src/seq_reservoir.h | 12 ++++++------
 2 files changed, 10 insertions(+), 10 deletions(-)

diff --git a/src/defs.h b/src/defs.h
index 1663737..c3c76aa 100644
--- a/src/defs.h
+++ b/src/defs.h
@@ -4,8 +4,8 @@
 //
 // Copyright(C) 2024-2024, S.Deorowicz, A.Gudys
 //
-// Version: 1.0.0
-// Date   : 2024-06-26
+// Version: 1.0.1
+// Date   : 2024-06-28
 // *******************************************************************************************
 
 #pragma once
@@ -15,8 +15,8 @@
 #include <string>
 #include "params.h"
 
-const std::string LZ_ANI_VER = "lz-ani 1.0";
-const std::string LZ_ANI_DATE = "2024-06-26";
+const std::string LZ_ANI_VER = "lz-ani 1.0.1";
+const std::string LZ_ANI_DATE = "2024-06-28";
 const std::string LZ_ANI_AUTHORS = "Sebastian Deorowicz, Adam Gudys";
 const std::string LZ_ANI_INFO = LZ_ANI_VER + " (" + LZ_ANI_DATE + ") by " + LZ_ANI_AUTHORS;
 
diff --git a/src/seq_reservoir.h b/src/seq_reservoir.h
index 78ad9df..16f2e8b 100644
--- a/src/seq_reservoir.h
+++ b/src/seq_reservoir.h
@@ -4,8 +4,8 @@
 //
 // Copyright(C) 2024-2024, S.Deorowicz, A.Gudys
 //
-// Version: 1.0.0
-// Date   : 2024-06-26
+// Version: 1.0.1
+// Date   : 2024-06-28
 // *******************************************************************************************
 
 #pragma once
@@ -127,10 +127,10 @@ class CSeqReservoir
 		dna_code{}
 	{
 		fill(dna_code.begin(), dna_code.end(), code_N_seq);
-		dna_code['A'] = code_A;
-		dna_code['C'] = code_C;
-		dna_code['G'] = code_G;
-		dna_code['T'] = code_T;
+		dna_code['A'] = dna_code['a'] = code_A;
+		dna_code['C'] = dna_code['c'] = code_C;
+		dna_code['G'] = dna_code['g'] = code_G;
+		dna_code['T'] = dna_code['t'] = code_T;
 	}
 
 	bool load_fasta(const vector<string>& fasta_files, uint32_t sep_len, uint32_t verbosity_level);