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pom.xml
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pom.xml
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<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>edu.scripps.yates</groupId>
<artifactId>pcomplex</artifactId>
<version>0.0.1-SNAPSHOT</version>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>utilities</artifactId>
<version>1.6-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>dtaselectparser</artifactId>
<version>1.1.2-SNAPSHOT</version>
</dependency>
<!-- <dependency> -->
<!-- <groupId>com.ipa.ip2</groupId> -->
<!-- <artifactId>ip2api</artifactId> -->
<!-- <version>1.3.0</version> -->
<!-- </dependency> -->
<!-- To enable machine optimized matrix computation, the users should add the dependency of smile-netlib: -->
<dependency>
<groupId>com.github.haifengl</groupId>
<artifactId>smile-netlib</artifactId>
<version>1.5.2</version>
</dependency>
<dependency>
<groupId>net.sf.jgap</groupId>
<artifactId>jgap</artifactId>
<version>3.4.4</version>
</dependency>
<!-- https://mvnrepository.com/artifact/nz.ac.waikato.cms.weka/weka-stable -->
<dependency>
<groupId>nz.ac.waikato.cms.weka</groupId>
<artifactId>weka-stable</artifactId>
<version>3.8.3</version>
</dependency>
<dependency>
<groupId>paccanarolab.org</groupId>
<artifactId>cluster-one</artifactId>
<version>1.0</version>
</dependency>
<dependency>
<groupId>uk.ac.ebi.pride.utilities</groupId>
<artifactId>ols-client</artifactId>
<version>2.13-SNAPSHOT</version>
<exclusions>
<exclusion>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-core</artifactId>
</exclusion>
<exclusion>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-classic</artifactId>
</exclusion>
</exclusions>
</dependency>
<!-- To fix problem: https://stackoverflow.com/questions/43702164/java-lang-nosuchmethoderror-org-springframework-http-mediatype-getcharsetljav -->
<dependency>
<groupId>edu.scripps.yates</groupId>
<artifactId>pint.annotations</artifactId>
<version>1.0.3-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>org.proteored</groupId>
<artifactId>pacom</artifactId>
<version>1.89</version>
</dependency>
</dependencies>
</project>