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Merge pull request #3177 from nf-core/nvnieuwk-patch-1
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bump nf-schema to v2.1.1 in the template
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nvnieuwk committed Sep 20, 2024
2 parents 282e8fe + e2c4740 commit 9e05574
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions nf_core/pipeline-template/nextflow.config
Original file line number Diff line number Diff line change
Expand Up @@ -274,11 +274,11 @@ manifest {
{% if nf_schema -%}
// Nextflow plugins
plugins {
id 'nf-schema@2.1.0' // Validation of pipeline parameters and creation of an input channel from a sample sheet
id 'nf-schema@2.1.1' // Validation of pipeline parameters and creation of an input channel from a sample sheet
}

validation {
defaultIgnoreParams = ["genomes", "helpFull", "showHidden", "help-full", "show-hidden"] // The last 4 parameters are here because of a bug in nf-schema. This will be fixed in a later version
defaultIgnoreParams = ["genomes"]
help {
enabled = true
command = "nextflow run $manifest.name -profile <docker/singularity/.../institute> --input samplesheet.csv --outdir <OUTDIR>"
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