Publish gsea reports

nf-core · Feb 21, 2024 · 32a270b · 32a270b
1 parent c22968c
commit 32a270b
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -305,6 +305,11 @@ process {
                 path: { "${params.outdir}/plots/gsea/${meta.id}/${gene_sets.baseName}" },
                 mode: params.publish_dir_mode,
                 pattern: '*.png'
+            ],
+            [
+                path: { "${params.outdir}/html/gsea/${meta.id}/${gene_sets.baseName}" },
+                mode: params.publish_dir_mode,
+                pattern: '*.{html,zip}'
             ]
         ]
         ext.args = { [