You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I am trying to install medaka using python virtual environment.
Here is the command I used: python3.8 -m venv medaka source ./medaka/bin/activate pip install medaka
However, I received an error message about the mismatched hashes as detailed below:
Collecting medaka
Using cached medaka-2.0.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (10.7 MB)
Collecting requests
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Collecting intervaltree
Using cached intervaltree-3.1.0.tar.gz (32 kB)
Collecting h5py~=3.10.0
Using cached h5py-3.10.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.8 MB)
Collecting wurlitzer
Using cached wurlitzer-3.1.1-py3-none-any.whl (8.6 kB)
Collecting ont-parasail
Using cached ont_parasail-1.3.4-py2.py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_28_x86_64.whl (15.8 MB)
Collecting tqdm
Using cached tqdm-4.66.5-py3-none-any.whl (78 kB)
Collecting cffi
Using cached cffi-1.17.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (446 kB)
Collecting torch~=2.3
Using cached torch-2.4.1-cp38-cp38-manylinux1_x86_64.whl (797.1 MB)
Collecting pyspoa>=0.2.1
Using cached pyspoa-0.2.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (990 kB)
Collecting edlib
Using cached edlib-1.3.9.post1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (381 kB)
Collecting numpy<2.0.0,>=1.21.0
Using cached numpy-1.24.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.3 MB)
Collecting ont-fast5-api
Using cached ont_fast5_api-4.1.3-py3-none-any.whl (2.3 MB)
Collecting pysam>=0.16.0.1
Using cached pysam-0.22.1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (21.9 MB)
Collecting ont-mappy
Using cached ont_mappy-2.28-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (756 kB)
Collecting charset-normalizer<4,>=2
Using cached charset_normalizer-3.3.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (141 kB)
Collecting idna<4,>=2.5
Using cached idna-3.10-py3-none-any.whl (70 kB)
Collecting urllib3<3,>=1.21.1
Using cached urllib3-2.2.3-py3-none-any.whl (126 kB)
Collecting certifi>=2017.4.17
Using cached certifi-2024.8.30-py3-none-any.whl (167 kB)
Collecting sortedcontainers<3.0,>=2.0
Using cached sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)
Collecting pycparser
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Requirement already satisfied: setuptools in ./medaka/lib/python3.8/site-packages (from ont-fast5-api->medaka) (44.0.0)
Collecting packaging
Using cached packaging-24.1-py3-none-any.whl (53 kB)
Collecting progressbar33>=2.3.1
Using cached progressbar33-2.4.tar.gz (10 kB)
ERROR: THESE PACKAGES DO NOT MATCH THE HASHES FROM THE REQUIREMENTS FILE. If you have updated the package versions, please update the hashes. Otherwise, examine the package contents carefully; someone may have tampered with them.
torch~=2.3 from https://files.pythonhosted.org/packages/a9/71/45aac46b75742e08d2d6f9fc2b612223b5e36115b8b2ed673b23c21b5387/torch-2.4.1-cp38-cp38-manylinux1_x86_64.whl#sha256=c99e1db4bf0c5347107845d715b4aa1097e601bdc36343d758963055e9599d93 (from medaka):
Expected sha256 c99e1db4bf0c5347107845d715b4aa1097e601bdc36343d758963055e9599d93
Got 3a355562d41f8b9043d83eebc41fc5dfe1bfbb6f321bfd7630823d5cba1ec6b9
How should I do to solve this?
Thanks a lot.
The text was updated successfully, but these errors were encountered:
Hi medaka dev team,
I am trying to install medaka using python virtual environment.
Here is the command I used:
python3.8 -m venv medaka
source ./medaka/bin/activate
pip install medaka
However, I received an error message about the mismatched hashes as detailed below:
How should I do to solve this?
Thanks a lot.
The text was updated successfully, but these errors were encountered: