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DESCRIPTION
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DESCRIPTION
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Package: multienrichjam
Type: Package
Title: Analysis and Visualization of Multiple Gene Set Enrichments
Version: 0.0.90.950
Authors@R: person(given="James M.", family="Ward",
email="jmw86069@gmail.com", role=c("aut", "cre"))
Maintainer: James M. Ward <jmw86069@gmail.com>
Description: Methods to analyze multiple gene set enrichment results,
extending EnrichMap (Merico, Bader) and clusterProfiler (Guangchuang Yu)
functions specifically to explore and compare multiple enrichment
results. New igraph node shape "coloredrectangle".
Depends: R (>= 3.5.0)
biocViews:
Imports: jamba (>= 0.0.88.900),
colorjam (>= 0.0.23.900),
igraph,
qgraph,
dplyr,
DOSE,
enrichplot,
clusterProfiler,
ComplexHeatmap,
matrixStats,
glue,
farver,
amap,
sf,
bezier
Suggests: knitr,
rmarkdown,
ahull,
shadowtext
License: GPL-2
Encoding: UTF-8
LazyData: true
Remotes: github::jmw86069/jamba,
github::jmw86069/colorjam
URL: http://github.com/jmw86069/multienrichjam
BugReports: http://github.com/jmw86069/multienrichjam/issues
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3