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load nifti as a volume #428

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MYWpro opened this issue Feb 9, 2023 · 12 comments
Closed

load nifti as a volume #428

MYWpro opened this issue Feb 9, 2023 · 12 comments

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@MYWpro
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MYWpro commented Feb 9, 2023

Can I directly load nifti as a volume? Do I have to convert the format to dicom to load nifti?

@sedghi
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sedghi commented Feb 10, 2023

Stay tuned, we are adding it soon. Development is done

@MYWpro
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MYWpro commented Feb 15, 2023

#311 Thank you for your hard work, I still have a question, can the updated content be able to save the modified segmentation to the local in nifti format?

@sedghi
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sedghi commented Feb 15, 2023

Yes it would be possible

@MYWpro MYWpro changed the title load nifti as a valume load nifti as a volume Feb 28, 2023
@MYWpro
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MYWpro commented Mar 5, 2023

Will the loading function be added this month? I'm looking forward to it.

@MYWpro
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MYWpro commented Mar 13, 2023

Hello, I'm sorry to bother you. I want to know whether Cornerstone3d support for the nifti format will be updated this month. Because I have an application that needs to use the nifti format and needs to be completed at the beginning of next month, can you tell me whether it will be updated?

Stay tuned, we are adding it soon. Development is done

@MYWpro MYWpro closed this as completed Mar 15, 2023
@acegank
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acegank commented May 18, 2023

more than three months have passed

@sedghi
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sedghi commented May 18, 2023

yeah I guess I shouldn't give definite times since priorities change, but we are releasing the new roadmap soon

@obiyoag
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obiyoag commented May 23, 2023

Hi @sedghi, when can we expect the new roadmap and nifti-volume-loading feature to be released? I would appreciate any information you can provide.

@adconk
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adconk commented Jun 30, 2023

hi @sedghi, do you know the status of nifti-volume-loading? I'm part of another interested party. Thx!

@Valar-hub
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I implement the function to load nifti as a volume by modifying a little of 'cornerstoneStreamingImageVolumeLoader.js' source code. But i'm too busy to give a detailed code for a short period of time. I can give some tips to implement it by modifying 'cornerstoneStreamingImageVolumeLoader.js' source code:1. change to image loader to the old 'nifti-image-loader' for legacy cornerstone. 2. nifti is not needed to calculate the zspace and resort the position,beacuse it's 3d, so we can just avoid this function-'sortImageIdsAndGetSpacing' from './helpers'. 3. nifti can get metaData from file instead of http request from web, so we use old 'nifti-image-loader' for legacy cornerstone to get metaData. In summary, we try to use the old API to deal the nifti file as 2D sequence, but maybe it is not enough efficent.

@sedghi
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sedghi commented Jul 10, 2023

I have a branch that has the preliminary work here, I will create a PR later. There are two new examples

@sedghi
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sedghi commented Jul 18, 2023

track here #696

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