Restoring to default 500000

cgpu · Oct 31, 2019 · eb8615d · eb8615d
1 parent dc6c16a
commit eb8615d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/main.nf b/main.nf
@@ -746,7 +746,7 @@ process MarkDuplicates {
     """
     gatk --java-options ${markdup_java_options} \
         MarkDuplicates \
-        --MAX_RECORDS_IN_RAM 10000 \
+        --MAX_RECORDS_IN_RAM 500000 \
         --INPUT ${idSample}.bam \
         --METRICS_FILE ${idSample}.bam.metrics \
         --TMP_DIR . \