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conda_env.yml
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conda_env.yml
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name: base
channels:
- r
- conda-forge
- defaults
dependencies:
- _ipyw_jlab_nb_ext_conf=0.1.0=py36h2fc01ae_0
- _r-mutex=1.0.0=anacondar_1
- alabaster=0.7.10=py36h174008c_0
- anaconda=custom=py36ha4fed55_0
- anaconda-client=1.6.9=py36_0
- anaconda-navigator=1.7.0=py36_0
- anaconda-project=0.8.2=py36h9ee5d53_0
- appnope=0.1.0=py36hf537a9a_0
- appscript=1.0.1=py36h9e71e49_1
- asn1crypto=0.24.0=py36_0
- astroid=1.6.1=py36_0
- astropy=2.0.3=py36h1de35cc_0
- attrs=17.4.0=py36_0
- babel=2.5.3=py36_0
- backports=1.0=py36ha3c1827_1
- backports.shutil_get_terminal_size=1.0.0=py36hd7a2ee4_2
- beautifulsoup4=4.6.0=py36h72d3c9f_1
- bitarray=0.8.1=py36h1de35cc_1
- bkcharts=0.2=py36h073222e_0
- blas=1.0=mkl
- blaze=0.11.3=py36h02e7a37_0
- bleach=2.1.2=py36_0
- bokeh=0.12.13=py36h2f9c1c0_0
- boto=2.48.0=py36hdbc59ac_1
- bottleneck=1.2.1=py36hbd380ad_0
- bwidget=1.9.11=0
- bzip2=1.0.6=hd86a083_4
- ca-certificates=2020.1.1=0
- cairo=1.14.12=hab642c4_0
- cctools=895=h7512d6f_0
- certifi=2019.11.28=py36_0
- cffi=1.11.4=py36h342bebf_0
- chardet=3.0.4=py36h96c241c_1
- clang=4.0.1=h662ec87_0
- clang_osx-64=4.0.1=h1ce6c1d_8
- clangxx=4.0.1=hc9b4283_0
- clangxx_osx-64=4.0.1=h22b1bf0_8
- click=6.7=py36hec950be_0
- cloudpickle=0.5.2=py36_1
- clyent=1.2.2=py36hae3ad88_0
- colorama=0.3.9=py36hd29a30c_0
- compiler-rt=4.0.1=h5487866_0
- conda=4.8.2=py36_0
- conda-build=3.4.1=py36_0
- conda-env=2.6.0=h36134e3_0
- conda-package-handling=1.6.0=py36h1de35cc_0
- conda-verify=2.0.0=py36he837df3_0
- contextlib2=0.5.5=py36hd66e5e7_0
- cryptography=2.6.1=py36ha12b0ac_0
- curl=7.64.0=ha441bb4_2
- cycler=0.10.0=py36hfc81398_0
- cython=0.27.3=py36h6ecb376_0
- cytoolz=0.9.0=py36h1de35cc_0
- dask=0.16.1=py36_0
- dask-core=0.16.1=py36_0
- datashape=0.5.4=py36hfb22df8_0
- dbus=1.12.2=h5243cc1_1
- decorator=4.2.1=py36_0
- distributed=1.20.2=py36_0
- docutils=0.14=py36hbfde631_0
- entrypoints=0.2.3=py36hd81d71f_2
- et_xmlfile=1.0.1=py36h1315bdc_0
- expat=2.2.5=hb8e80ba_0
- fastcache=1.0.2=py36h1de35cc_2
- filelock=2.0.13=py36hf9de95b_0
- flask=0.12.2=py36h5658096_0
- flask-cors=3.0.3=py36h7387b97_0
- fontconfig=2.12.6=h9850fc5_0
- freetype=2.8=h12048fb_1
- get_terminal_size=1.0.0=h7520d66_0
- gettext=0.19.8.1=h15daf44_3
- gevent=1.2.2=py36ha70b9d6_0
- gfortran_osx-64=4.8.5=h22b1bf0_3
- glib=2.53.6=h33f6a65_2
- glob2=0.6=py36h94c9186_0
- gmp=6.1.2=hb37e062_1
- gmpy2=2.0.8=py36hf9c35bd_2
- graphite2=1.3.10=h337f25e_1
- greenlet=0.4.12=py36hf09ba7b_0
- gsl=2.2.1=h002c638_3
- h5py=2.7.1=py36h39cdac5_0
- harfbuzz=1.7.4=h08e020e_0
- hdf5=1.10.1=ha036c08_1
- heapdict=1.0.0=py36_2
- html5lib=1.0.1=py36h2f9c1c0_0
- icu=58.2=h4b95b61_1
- idna=2.6=py36h8628d0a_1
- imageio=2.2.0=py36h5e01289_0
- imagesize=0.7.1=py36h3495948_0
- intel-openmp=2018.0.0=h8158457_8
- ipykernel=4.8.0=py36_0
- ipython=6.2.1=py36h3dda519_1
- ipython_genutils=0.2.0=py36h241746c_0
- ipywidgets=7.1.1=py36_0
- isort=4.2.15=py36hceb2a01_0
- itsdangerous=0.24=py36h49fbb8d_1
- jbig=2.1=h4d881f8_0
- jdcal=1.3=py36h1986823_0
- jedi=0.11.1=py36_0
- jinja2=2.10=py36hd36f9c5_0
- jpeg=9b=he5867d9_2
- jsonschema=2.6.0=py36hb385e00_0
- jupyter=1.0.0=py36_4
- jupyter_client=5.2.2=py36_0
- jupyter_console=5.2.0=py36hccf5b1c_1
- jupyter_core=4.4.0=py36h79cf704_0
- jupyterlab=0.31.5=py36_0
- jupyterlab_launcher=0.10.2=py36_0
- kiwisolver=1.0.1=py36h0a44026_0
- krb5=1.16.1=hddcf347_7
- lazy-object-proxy=1.3.1=py36h2fbbe47_0
- ld64=274.2=h7c2db76_0
- libcurl=7.64.0=h051b688_2
- libcxx=4.0.1=h579ed51_0
- libcxxabi=4.0.1=hebd6815_0
- libedit=3.1.20181209=hb402a30_0
- libffi=3.2.1=h475c297_4
- libgfortran=3.0.1=h93005f0_2
- libiconv=1.15=hdd342a3_7
- libpng=1.6.34=he12f830_0
- libsodium=1.0.15=hd9e47c5_0
- libssh2=1.8.0=ha12b0ac_4
- libtiff=4.0.9=h0dac147_0
- libxml2=2.9.7=hab757c2_0
- libxslt=1.1.32=hb819dd2_0
- llvm=4.0.1=hc748206_0
- llvm-lto-tapi=4.0.1=h6701bc3_0
- llvm-openmp=4.0.1=hda82c8b_0
- locket=0.2.0=py36hca03003_1
- lxml=4.1.1=py36hef8c89e_1
- lzo=2.10=h362108e_2
- markupsafe=1.0=py36h3a1e703_1
- matplotlib=2.2.2=py36ha7267d0_0
- matplotlib-venn=0.11.5=py36_0
- mccabe=0.6.1=py36hdaeb55d_0
- mistune=0.8.3=py36_0
- mkl=2019.4=233
- mkl-service=2.3.0=py36hfbe908c_0
- mkl_fft=1.0.15=py36h5e564d8_0
- mkl_random=1.1.0=py36ha771720_0
- mpc=1.0.3=h7a72875_5
- mpfr=3.1.5=h711e7fd_2
- mpmath=1.0.0=py36hf1b8295_2
- msgpack-python=0.5.1=py36h04f5b5a_0
- multipledispatch=0.4.9=py36hc5f92b5_0
- navigator-updater=0.1.0=py36h7aee5fb_0
- nbconvert=5.3.1=py36h810822e_0
- nbformat=4.4.0=py36h827af21_0
- ncurses=6.1=h0a44026_1
- networkx=2.1=py36_0
- nltk=3.2.5=py36h1190bce_0
- nose=1.3.7=py36h73fae2b_2
- notebook=5.4.0=py36_0
- numexpr=2.6.4=py36habcfcfe_0
- numpy=1.18.1=py36h7241aed_0
- numpy-base=1.18.1=py36h6575580_1
- numpydoc=0.7.0=py36he54d08e_0
- odo=0.5.1=py36hc1af34a_0
- olefile=0.45.1=py36_0
- openssl=1.1.1d=h1de35cc_4
- packaging=16.8=py36he5e8135_0
- pandoc=1.19.2.1=ha5e8f32_1
- pandocfilters=1.4.2=py36h3b0b094_1
- pango=1.41.0=h3bae10e_0
- parso=0.1.1=py36hc90e01c_0
- partd=0.3.8=py36hf5c4cb8_0
- path.py=10.5=py36h7bcb313_0
- pathlib2=2.3.0=py36h877a6d8_0
- patsy=0.5.1=py36_0
- pcre=8.41=hfb6ab37_1
- pep8=1.7.1=py36_0
- pexpect=4.3.1=py36_0
- pickleshare=0.7.4=py36hf512f8e_0
- pillow=5.0.0=py36hfcce615_0
- pixman=0.34.0=hca0a616_3
- pkginfo=1.4.1=py36h25bf955_0
- pluggy=0.6.0=py36hb1d0581_0
- ply=3.10=py36h10e714e_0
- prompt_toolkit=1.0.15=py36haeda067_0
- psutil=5.4.3=py36h1de35cc_0
- ptyprocess=0.5.2=py36he6521c3_0
- py=1.5.2=py36ha69170d_0
- pycodestyle=2.3.1=py36h83e8646_0
- pycosat=0.6.3=py36hee92d8f_0
- pycparser=2.18=py36h724b2fc_1
- pycrypto=2.6.1=py36h1de35cc_7
- pycurl=7.43.0.2=py36ha12b0ac_0
- pyflakes=1.6.0=py36hea45e83_0
- pygments=2.2.0=py36h240cd3f_0
- pylint=1.8.2=py36_0
- pyodbc=4.0.22=py36h0a44026_0
- pyopenssl=17.5.0=py36h51e4350_0
- pyparsing=2.2.0=py36hb281f35_0
- pyqt=5.6.0=py36he5c6137_6
- pysocks=1.6.7=py36hfa33cec_1
- pytables=3.4.2=py36hfbd7ab0_2
- pytest=3.3.2=py36_0
- python=3.6.8=haf84260_0
- python-dateutil=2.6.1=py36h86d2abb_1
- python.app=2=py36h54569d5_7
- pytz=2017.3=py36hf0bf824_0
- pywavelets=0.5.2=py36h2710a04_0
- pyyaml=3.12=py36h2ba1e63_1
- pyzmq=16.0.3=py36he48b5ad_0
- qt=5.6.2=h9975529_14
- qtawesome=0.4.4=py36h468c6fb_0
- qtconsole=4.3.1=py36hd96c0ff_0
- qtpy=1.3.1=py36h16bb863_0
- r-assertthat=0.2.0=r343h889e2dd_0
- r-bh=1.65.0_1=r343h889e2dd_0
- r-bindr=0.1=r343h889e2dd_0
- r-bindrcpp=0.2=r343he124285_0
- r-bit=1.1_12=r343h7f474d2_0
- r-bit64=0.9_7=r343h7f474d2_0
- r-blob=1.1.0=r343h889e2dd_0
- r-cli=1.0.0=r343h889e2dd_0
- r-crayon=1.3.4=r343h889e2dd_0
- r-dbi=0.7=r343h889e2dd_0
- r-dbplyr=1.1.0=r343h889e2dd_0
- r-digest=0.6.13=r343h7f474d2_0
- r-dplyr=0.7.4=r343he124285_0
- r-glue=1.2.0=r343h7f474d2_0
- r-magrittr=1.5=r343h889e2dd_4
- r-memoise=1.1.0=r343h889e2dd_0
- r-pillar=1.0.1=r343h889e2dd_0
- r-pkgconfig=2.0.1=r343h889e2dd_0
- r-plogr=0.1_1=r343h889e2dd_0
- r-purrr=0.2.4=r343h7f474d2_0
- r-r6=2.2.2=r343h889e2dd_0
- r-rcpp=0.12.14=r343he124285_0
- r-rlang=0.1.6=r343h7f474d2_0
- r-rsqlite=2.0=r343he124285_0
- r-tibble=1.4.1=r343h7f474d2_0
- r-utf8=1.1.2=r343h7f474d2_0
- readline=7.0=hc1231fa_4
- requests=2.18.4=py36h4516966_1
- rope=0.10.7=py36h68959ac_0
- ruamel_yaml=0.15.35=py36h1de35cc_1
- scikit-image=0.13.1=py36h1de35cc_1
- scipy=1.4.1=py36h9fa6033_0
- seaborn=0.9.0=py36_0
- send2trash=1.4.2=py36_0
- setuptools=38.4.0=py36_0
- simplegeneric=0.8.1=py36_2
- singledispatch=3.4.0.3=py36hf20db9d_0
- sip=4.18.1=py36h2824476_2
- six=1.11.0=py36h0e22d5e_1
- snowballstemmer=1.2.1=py36h6c7b616_0
- sortedcollections=0.5.3=py36he9c3ed6_0
- sphinx=1.6.6=py36_0
- sphinxcontrib=1.0=py36h9364dc8_1
- sphinxcontrib-websupport=1.0.1=py36h92f4a7a_1
- spyder=3.2.6=py36_0
- sqlalchemy=1.2.1=py36h1de35cc_0
- sqlite=3.27.2=ha441bb4_0
- statsmodels=0.9.0=py36h1d22016_0
- sympy=1.1.1=py36h7f3cf04_0
- tblib=1.3.2=py36hda67792_0
- terminado=0.8.1=py36_1
- testpath=0.3.1=py36h625a49b_0
- tk=8.6.8=ha441bb4_0
- tktable=2.10=h1de35cc_0
- toolz=0.9.0=py36_0
- tornado=4.5.3=py36_0
- tqdm=4.42.1=py_0
- traitlets=4.3.2=py36h65bd3ce_0
- typing=3.6.2=py36haa2d9ef_0
- unicodecsv=0.14.1=py36he531d66_0
- unixodbc=2.3.4=h4cb4dde_1
- urllib3=1.22=py36h68b9469_0
- wcwidth=0.1.7=py36h8c6ec74_0
- webencodings=0.5.1=py36h3b9701d_1
- werkzeug=0.14.1=py36_0
- wheel=0.30.0=py36h5eb2c71_1
- widgetsnbextension=3.1.0=py36_0
- wrapt=1.10.11=py36hc29e774_0
- xlrd=1.1.0=py36h336f4a2_1
- xlsxwriter=1.0.2=py36h3736301_0
- xlwings=0.11.5=py36_0
- xlwt=1.2.0=py36h5ad1178_0
- xz=5.2.4=h1de35cc_4
- yaml=0.1.7=hc338f04_2
- zeromq=4.2.2=ha360ad0_2
- zict=0.1.3=py36h71da714_0
- zlib=1.2.11=hf3cbc9b_2
- pip:
- anndata==0.6.17
- annoy==1.15.2
- appdirs==1.4.3
- awscli==1.16.88
- bcrypt==3.1.6
- bhtsne==0.1.9
- biopython==1.70
- boto3==1.9.78
- botocore==1.12.78
- cairocffi==0.9.0
- cairosvg==2.2.1
- coverage==4.5.2
- cssselect2==0.2.1
- datacache==0.5.5
- defusedxml==0.5.0
- dictset==0.3.1.2
- dill==0.2.8.2
- ecdsa==0.13
- fastcluster==1.1.25
- fbpca==1.0
- gtfparse==1.0.7
- intervaltree==2.1.0
- jmespath==0.9.3
- joblib==0.13.1
- jupyter-contrib-core==0.3.3
- jupyter-contrib-nbextensions==0.5.1
- jupyter-highlight-selected-word==0.2.0
- jupyter-latex-envs==1.4.6
- jupyter-nbextensions-configurator==0.4.1
- llvmlite==0.27.0
- lml==0.0.9
- louvain==0.6.1
- memoized-property==1.0.3
- mnnpy==0.1.9.5
- mock==2.0.0
- multicoretsne==0.1
- multiprocessing-on-dill==3.5.0a4
- natsort==5.5.0
- nimfa==1.3.4
- nose2==0.8.0
- numba==0.42.0
- openpyxl==2.6.0
- orderedset==2.0.1
- pandas==0.24.1
- paramiko==2.4.2
- pbr==3.1.1
- phenograph==1.5.2
- pip==19.0.3
- progressbar33==2.4
- pyasn1==0.4.5
- pyensembl==1.2.6
- pyexcel==0.5.10
- pyexcel-io==0.5.13
- pynacl==1.3.0
- pyphen==0.9.5
- pystaggrelite3==0.1.3
- python-igraph==0.7.1.post6
- regex==2018.11.22
- rsa==3.4.2
- s3transfer==0.1.13
- scanorama==1.0
- scanpy==1.4
- scikit-learn==0.20.3
- seqc==0.2.0
- serializable==0.1.1
- simplejson==3.13.2
- sortedcontainers==2.1.0
- stac==1.1.0
- style==1.1.0
- texttable==1.6.1
- tinycss2==0.6.1
- tinydb==3.12.2
- tinytimer==0.0.0
- typechecks==0.1.0
- update==0.0.1
- weasyprint==44
- wurlitzer==1.0.2
prefix: /anaconda3