diff --git a/docker/DockerfileGit b/docker/DockerfileGit index 05bbde4..c8c0763 100644 --- a/docker/DockerfileGit +++ b/docker/DockerfileGit @@ -31,5 +31,9 @@ RUN apt-get update && apt-get install -y --no-install-recommends curl ca-certifi && conda install -y -c conda-forge crcmod \ # install cellbender and its dependencies && yes | pip install --no-cache-dir -U git+https://github.com/broadinstitute/CellBender.git@$GIT_SHA \ +# To address this error: +#ImportError: lxml.html.clean module is now a separate project lxml_html_clean. +#Install lxml[html_clean] or lxml_html_clean directly. + && pip install lxml_html_clean \ && conda clean -yaf \ && sudo rm -rf ~/.cache/pip