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R-package install.packages("mxnet") broken #17246

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dingbo8128 opened this issue Jan 8, 2020 · 4 comments
Open

R-package install.packages("mxnet") broken #17246

dingbo8128 opened this issue Jan 8, 2020 · 4 comments
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Bug Installation R

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@dingbo8128
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Error Message

试开URL’https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Error in download.file(url, destfile, method, mode = "wb", ...) :
无法打开URL'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
此外: Warning messages:
1: In doTryCatch(return(expr), name, parentenv, handler) :
无法载入共享目标对象‘/Library/Frameworks/R.framework/Resources/modules//R_X11.so’：:
dlopen(/Library/Frameworks/R.framework/Resources/modules//R_X11.so, 6): Library not loaded: /opt/X11/lib/libSM.6.dylib
Referenced from: /Library/Frameworks/R.framework/Versions/3.6/Resources/modules/R_X11.so
Reason: image not found
2: In download.file(url, destfile, method, mode = "wb", ...) :
cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz': HTTP status was '404 Not Found'
Warning in download.packages(pkgs, destdir = tmpd, available = available, :
下载程序包‘mxnet’时出了问题

To Reproduce

Steps to reproduce

(Paste the commands you ran that produced the error.)

cran <- getOption("repos")
cran["dmlc"] <- "https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/"

options(repos = cran)
install.packages("mxnet")

Environment

macOs Catalina 10.15.1
R version 3.6.2 (2019-12-12) -- "Dark and Stormy Night"
@dingbo8128 dingbo8128 added the Bug label Jan 8, 2020
@leezu
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leezu commented Jan 8, 2020

Currently only the following files are available.

% aws s3 ls --recursive s3://apache-mxnet/R/CRAN/
2018-07-27 21:42:21         14 R/CRAN/GPU/README.md
2019-04-15 22:34:14        302 R/CRAN/GPU/cu100/bin/windows/contrib/3.5/PACKAGES
2019-04-15 22:34:14        241 R/CRAN/GPU/cu100/bin/windows/contrib/3.5/PACKAGES.gz
2019-04-15 22:34:14        444 R/CRAN/GPU/cu100/bin/windows/contrib/3.5/PACKAGES.rds
2019-04-15 22:34:14  403122737 R/CRAN/GPU/cu100/bin/windows/contrib/3.5/mxnet_1.4.0.zip
2018-07-27 21:42:21         13 R/CRAN/GPU/cu80/README.md
2018-07-27 21:43:09        299 R/CRAN/GPU/cu80/bin/windows/contrib/3.5/PACKAGES
2018-07-27 21:43:09        238 R/CRAN/GPU/cu80/bin/windows/contrib/3.5/PACKAGES.gz
2018-07-27 21:42:21        440 R/CRAN/GPU/cu80/bin/windows/contrib/3.5/PACKAGES.rds
2018-07-27 21:42:21  280435188 R/CRAN/GPU/cu80/bin/windows/contrib/3.5/mxnet_1.3.0.zip
2018-07-30 23:00:45        347 R/CRAN/GPU/cu80/src/contrib/PACKAGES
2018-07-30 23:00:45        275 R/CRAN/GPU/cu80/src/contrib/PACKAGES.gz
2018-07-30 23:00:45        484 R/CRAN/GPU/cu80/src/contrib/PACKAGES.rds
2018-07-27 21:42:21         13 R/CRAN/GPU/cu90/README.md
2019-04-15 22:34:14        302 R/CRAN/GPU/cu90/bin/windows/contrib/3.5/PACKAGES
2019-04-15 22:34:14        241 R/CRAN/GPU/cu90/bin/windows/contrib/3.5/PACKAGES.gz
2019-04-15 22:34:14        444 R/CRAN/GPU/cu90/bin/windows/contrib/3.5/PACKAGES.rds
2018-07-27 21:42:21  301612282 R/CRAN/GPU/cu90/bin/windows/contrib/3.5/mxnet_1.3.0.zip
2019-04-15 22:34:14  397964881 R/CRAN/GPU/cu90/bin/windows/contrib/3.5/mxnet_1.4.0.zip
2018-07-30 23:00:45        347 R/CRAN/GPU/cu90/src/contrib/PACKAGES
2018-07-30 23:00:45        275 R/CRAN/GPU/cu90/src/contrib/PACKAGES.gz
2018-07-30 23:00:45        484 R/CRAN/GPU/cu90/src/contrib/PACKAGES.rds
2018-07-27 21:43:03         13 R/CRAN/GPU/cu91/README.md
2019-04-15 22:34:14        302 R/CRAN/GPU/cu91/bin/windows/contrib/3.5/PACKAGES
2019-04-15 22:34:14        241 R/CRAN/GPU/cu91/bin/windows/contrib/3.5/PACKAGES.gz
2019-04-15 22:34:14        444 R/CRAN/GPU/cu91/bin/windows/contrib/3.5/PACKAGES.rds
2018-07-27 21:43:04  302720530 R/CRAN/GPU/cu91/bin/windows/contrib/3.5/mxnet_1.3.0.zip
2019-04-15 22:34:14  451358214 R/CRAN/GPU/cu91/bin/windows/contrib/3.5/mxnet_1.4.0.zip
2018-07-30 23:00:45        347 R/CRAN/GPU/cu91/src/contrib/PACKAGES
2018-07-30 23:00:45        275 R/CRAN/GPU/cu91/src/contrib/PACKAGES.gz
2018-07-30 23:00:45        484 R/CRAN/GPU/cu91/src/contrib/PACKAGES.rds
2018-07-27 21:43:10         13 R/CRAN/GPU/cu92/README.md
2019-04-15 22:34:14        302 R/CRAN/GPU/cu92/bin/windows/contrib/3.5/PACKAGES
2019-04-15 22:34:14        241 R/CRAN/GPU/cu92/bin/windows/contrib/3.5/PACKAGES.gz
2019-04-15 22:34:14        444 R/CRAN/GPU/cu92/bin/windows/contrib/3.5/PACKAGES.rds
2018-07-27 21:43:10  304712612 R/CRAN/GPU/cu92/bin/windows/contrib/3.5/mxnet_1.3.0.zip
2019-04-15 22:34:14  453226494 R/CRAN/GPU/cu92/bin/windows/contrib/3.5/mxnet_1.4.0.zip
2018-07-30 23:00:45        347 R/CRAN/GPU/cu92/src/contrib/PACKAGES
2018-07-30 23:00:45        275 R/CRAN/GPU/cu92/src/contrib/PACKAGES.gz
2018-07-30 23:00:45        484 R/CRAN/GPU/cu92/src/contrib/PACKAGES.rds
2018-07-09 17:43:27        728 R/CRAN/bin/macosx/el-capitan/contrib/3.4/PACKAGES
2018-07-09 17:43:27        409 R/CRAN/bin/macosx/el-capitan/contrib/3.4/PACKAGES.gz
2018-07-09 17:43:27        608 R/CRAN/bin/macosx/el-capitan/contrib/3.4/PACKAGES.rds
2017-08-10 00:39:55    5382430 R/CRAN/bin/macosx/el-capitan/contrib/3.4/mxnet_0.10.1.tgz
2018-07-09 17:43:58   10238433 R/CRAN/bin/macosx/el-capitan/contrib/3.4/mxnet_1.3.0.tgz
2018-07-09 17:43:31     697657 R/CRAN/bin/macosx/el-capitan/contrib/3.4/xgboost_0.6.4.6.tgz
2019-04-15 22:36:01        332 R/CRAN/bin/macosx/el-capitan/contrib/3.5/PACKAGES
2019-04-15 22:36:01        267 R/CRAN/bin/macosx/el-capitan/contrib/3.5/PACKAGES.gz
2019-04-15 22:36:02        472 R/CRAN/bin/macosx/el-capitan/contrib/3.5/PACKAGES.rds
2018-07-09 17:43:58   10369234 R/CRAN/bin/macosx/el-capitan/contrib/3.5/mxnet_1.3.0.tgz
2019-04-15 22:36:11   11399662 R/CRAN/bin/macosx/el-capitan/contrib/3.5/mxnet_1.4.0.tgz
2018-06-25 06:36:43        298 R/CRAN/bin/windows/contrib/3.3/PACKAGES
2018-06-25 06:36:43        237 R/CRAN/bin/windows/contrib/3.3/PACKAGES.gz
2018-06-25 06:36:43        436 R/CRAN/bin/windows/contrib/3.3/PACKAGES.rds
2017-08-10 00:15:02   17789376 R/CRAN/bin/windows/contrib/3.3/mxnet_0.10.1.zip
2018-06-25 06:38:02   30271696 R/CRAN/bin/windows/contrib/3.3/mxnet_1.3.0.zip
2018-06-25 06:36:43        677 R/CRAN/bin/windows/contrib/3.4/PACKAGES
2018-06-25 06:36:43        365 R/CRAN/bin/windows/contrib/3.4/PACKAGES.gz
2018-06-25 06:36:43        564 R/CRAN/bin/windows/contrib/3.4/PACKAGES.rds
2017-08-10 00:15:02   17789376 R/CRAN/bin/windows/contrib/3.4/mxnet_0.10.1.zip
2018-06-25 06:38:03   30307029 R/CRAN/bin/windows/contrib/3.4/mxnet_1.3.0.zip
2018-06-25 06:37:02    1662775 R/CRAN/bin/windows/contrib/3.4/xgboost_0.6.4.6.zip
2019-04-15 22:36:02        302 R/CRAN/bin/windows/contrib/3.5/PACKAGES
2019-04-15 22:36:02        241 R/CRAN/bin/windows/contrib/3.5/PACKAGES.gz
2019-04-15 22:36:02        444 R/CRAN/bin/windows/contrib/3.5/PACKAGES.rds
2018-06-25 06:38:02   30443134 R/CRAN/bin/windows/contrib/3.5/mxnet_1.3.0.zip
2019-04-15 22:36:13   19646563 R/CRAN/bin/windows/contrib/3.5/mxnet_1.4.0.zip
2018-09-04 18:22:55        347 R/CRAN/src/contrib/PACKAGES
2018-09-04 18:22:55        275 R/CRAN/src/contrib/PACKAGES.gz
2018-09-04 18:22:55        484 R/CRAN/src/contrib/PACKAGES.rds

How did you arrive at the src url that you report as missing?

@dingbo8128
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I just run install.packages("mxnet")

@leezu leezu changed the title error when download mxnet http status '404 Not Found' R-package install.packages("mxnet") broken Jan 9, 2020
@leezu
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leezu commented Jan 9, 2020 •
edited
Loading

Until this is fixed, you can try following the compile-from source guide instead: https://mxnet.apache.org/get_started/ubuntu_setup.html#install-the-mxnet-package-for-r

There is also a PR which simplifies the guide a bit
#17228

@ChaiBapchya
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All 3 links return a 403/404

https://s3-us-west-2.amazonaws.com/apache-mxnet/R/CRAN/

> cran <- getOption("repos")
> cran["dmlc"] <- "https://s3-us-west-2.amazonaws.com/apache-mxnet/R/CRAN/"
> options(repos = cran)
> install.packages("mxnet",dependencies = T)
trying URL 'https://s3-us-west-2.amazonaws.com/apache-mxnet/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
  cannot open URL 'https://s3-us-west-2.amazonaws.com/apache-mxnet/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz': HTTP status was '404 Not Found'
Error in download.file(url, destfile, method, mode = "wb", ...) : 
  cannot open URL 'https://s3-us-west-2.amazonaws.com/apache-mxnet/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'

https://s3.amazonaws.com/mxnet-r/

> cran <- getOption("repos")
> cran["dmlc"] <- "https://s3.amazonaws.com/mxnet-r/"
> options(repos = cran)
> install.packages("mxnet")
trying URL 'https://s3.amazonaws.com/mxnet-r/src/contrib/mxnet_0.10.1.tar.gz'
Warning in install.packages :
  cannot open URL 'https://s3.amazonaws.com/mxnet-r/src/contrib/mxnet_0.10.1.tar.gz': HTTP status was '403 Forbidden'

https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/

> cran <- getOption("repos")
> cran["dmlc"] <- "https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/"
> options(repos = cran)
> install.packages("mxnet")
Installing package into ‘/home/rstudio-user/R/x86_64-pc-linux-gnu-library/3.6’
(as ‘lib’ is unspecified)
trying URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
  cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz': HTTP status was '404 Not Found'
Error in download.file(url, destfile, method, mode = "wb", ...) : 
  cannot open URL 'https://apache-mxnet.s3-accelerate.dualstack.amazonaws.com/R/CRAN/src/contrib/mxnet_1.3.0.tar.gz'
Warning in install.packages :
  download of package ‘mxnet’ failed

Looks like they aren't distribute / links are broken.

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@leezu @dingbo8128 @ChaiBapchya