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Error in rule extract_kmersGWAS #36

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ChristianDina opened this issue Jul 15, 2024 · 0 comments
Open

Error in rule extract_kmersGWAS #36

ChristianDina opened this issue Jul 15, 2024 · 0 comments

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@ChristianDina
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Hi all, I am finding this error :

Error in rule extract_kmersGWAS:
jobid: 1136
input: scripts/external/kmers_gwas/v0.3-beta.zip
output: scripts/external/kmers_gwas/kmers_gwas.py, scripts/external/kmers_gwas/bin
log: logs/build_kmers_gwas/extract_kmersGWAS.unzip.log (check log file(s) for error details)
conda-env: /CONDAS/users/dina-c/snmk-env-default/df67cf55a679a080af7c665814d3493a_
shell:
unzip scripts/external/kmers_gwas/v0.3-beta.zip -d scripts/external/kmers_gwas 2> logs/build_kmers_gwas/extract_kmersGWAS.unzip.log
(one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)

IN THE LOG FILE I HAVE :
replace scripts/external/kmers_gwas/build/kmc_file.d? [y]es, [n]o, [A]ll, [N]one, [r]ename: NULL
(EOF or read error, treating as "[N]one" ...)

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