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dot_plot return empty figure #362

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xiangyupan opened this issue Feb 11, 2022 · 1 comment
Open

dot_plot return empty figure #362

xiangyupan opened this issue Feb 11, 2022 · 1 comment

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@xiangyupan
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Dear anyone,
Thanks for your excelllent work. I want to use cellphonedb to analysis my 10x scRNA data.
The "method" parameter goes sucessfully and four files are generated.
But when I run the command of `cellphone plot dot_plot'. There has no error and it generate a empty plot.pdf file.
I also compare the content of example files with my files. The format is consistent. I am not sure what 's wrong with my files.
I put my files in the attachment. Wish someone could help me!

Thank you!
means.txt
pvalues.txt

@hongdavid94
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Hello,

If your pdf file size is not 0 byte, I would recommend you to open the file using google chrome instead of adobe acrobat. I opened my pdf in adobe acrobat and it seemed empty.

Hope this helps

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