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@OHDSIVocabularyReleaseRobot OHDSIVocabularyReleaseRobot released this 30 Aug 10:50
· 11 commits to master since this release
c51f368

This guide can provide you more background on how to read the release notes.

What's New

1. Structural changes

  • Pack_content table is now available via the Vocabulary-v5.0 GitHub repository through the releases (“assets” section).
  • We deliver the SSSOM-compatible metadata for certain relationships (link). The metadata mimics the one we collect during the community contribution process and contains the following information:
    • Relationship metadata
    • Concept metadata

NB! The structure of basic vocabulary tables (i.e. concept, concept_relationship) is not changed, and the first release of metadata is stored in separate tables.

2. ATC

  • ATC has been refreshed to the most recent January 2024 version. This update includes adding 272 new 5th-level codes, 24 new 4th-level codes, and 2 new 3rd-level codes.
  • Concepts’ level overview:
    • We corrected the names of ATC classes based on the refined assignment of routes of administration.
  • Relationships’ level overview:
    • We introduced a new source-based approach to derive relationships from existing drug vocabularies and greatly refined the relationships to improve accuracy and comprehensiveness. Our current approach relies on external sources, such as dm+d, GRR, UMLS, VANDF, JMDC, DPD, BDPM, Norway drug bank and other proprietary sources. This extensive library of relationships has been curated semi-automatically to construct relationships between ATC and RxNorm / RxNorm Extension vocabulary. As a result, we’ve created more than 9000 new ATC - RxNorm relationships.
    • We constructed new relationships for the ATC codes introduced since the previous release.
    • We cleaned up old relationships from ATC to RxNorm drugs and ingredients, resulting in more than 7000 deprecated links.

3. LOINC

  • LOINC vocabulary has been updated with its 2.77 Feb 2024 version.
  • Relationships’ level overview:
    • The LOINC-SNOMED hierarchy has been expanded with more than 230 new ‘Is a’ relationships.
    • SNOMED concepts in the Measurement domain mapped to LOINC during the previous release have become standard and their mappings to LOINC have been reverted. LOINC - SNOMED deduplication to be discussed in future Vocabulary WG sessions.

4. SNOMED package

  • SNOMED has been updated according to the following versions of its modules:
    • 2024-02-01 SNOMED CT International;
    • 2024-03-01 SNOMED CT US Edition;
    • 2024-04-10 SNOMED CT UK Edition.
  • Concepts’ level overview:
    • Allergic reactions have been moved to the Condition domain.
    • Patient encounters have been moved to the Observation domain.
  • Relationships’ level overview:
    • SNOMED concepts in the Measurement domain mapped to LOINC during the previous release have become standard and their mappings to LOINC have been reverted. LOINC - SNOMED deduplication to be discussed in future Vocabulary WG sessions.
    • Some of the SNOMED concepts were mapped over to their standard counterparts.
  • It includes both cases when SNOMED concepts were standard and cases when SNOMED concepts did not have mappings. Currently, these affect the following chapters:
    • Vaccine and immunization codes in the procedure domain: 628 concepts
    • Units, providers and drugs: 137 concepts
    • Geography: 19 concepts
  • According to the discussion around the post-coordination of pre-coordinated SNOMED measurements, we do not perform any further post-coordination.

5. MedDRA

  • MedDRA has been updated according to the source version 27.0, effective from March 2024.
  • Relationships’ level overview:
    • The MedDRA-SNOMED / OMOP Extension hierarchy has been expanded.
    • A total of 2891 PT concepts and 215 LLTs have been mapped to concepts in standard vocabularies, primarily SNOMED.
    • Hierarchy mirroring (bugfix):
      • Pre-coordinated MedDRA terms (Measurements) are currently positioned below general SNOMED in affected cases.

6. HCPCS

  • HCPCS has been updated according to the July 2024 version.
  • Concepts’ level overview:
    • We improved the precision of validity dates of reused codes to ensure more accurate cohort building.
  • Relationships’ level overview:
    • We improved drug mapping (incl. community contribution).

7. CPT4

  • CPT4 has been updated according to the 2024AA version of UMLS Metathesaurus.
  • Relationships’ level overview:
    • Newly added immunization codes 90624 and 90695 have been mapped to Standard concepts in the Drug domain.
    • We expanded the CPT4 - SNOMED hierarchy by embedding 1164 CPT4 anesthesia-related codes into the SNOMED hierarchy.
    • ‘CPT4 - SNOMED cat’ relationships will continue to contribute to the hierarchy. After extensive testing, we concluded that their exclusion from the hierarchy leaves a large number of standard procedure codes outside the concepts_ancestor.

8. CMS Place of Service

  • CMS Place of Service vocabulary has been updated according to the May 2, 2024 version.
  • Concepts’ level overview:
    • We added a note ‘(Deprecated)’ to the names of the codes deprecated by the source concepts. These codes are maintained as Standard (unless they are mapped).
    • Concept ‘27, Inpatient Long-term Care (Deprecated)’ has been deprecated by the source and its concept code was reused. According to our current policy, we do not update the names of the reused codes.
  • Relationships’ level overview:
    • Concepts ‘02, Telehealth Provided Other than in Patient’s Home’ and ‘10, Telehealth Provided in Patient’s Home’ have been destandardized and mapped to the Standard Telehealth concept in the Visit vocabulary, as well as other concepts, previously mapped to ‘02, Telehealth Provided Other than in Patient’s Home’ and ‘10, Telehealth Provided in Patient’s Home’

9. Visit

  • Concepts’ level overview:
    • A new OMOP-created concept has been added to the Visit vocabulary: OMOP5556618, Telehealth. This concept is intended to be a standard concept for all Telehealth visits, with CMS Place of Service codes 02 and 10 mapped to it.

10. Read

  • Relationships’ level overview:
    • More than 700 missing ‘Maps to value’ relationships have been added (bugfix)

11. СDISC

  • In partnership with the Critical Path Institute, we introduce the CDISC (Clinical Data Interchange Standards Consortium) - a cornerstone terminology used in SDTM (data model for clinical trial data). We used the 2023_11 version.
  • Concepts’ level overview:
    • We used NCI-metathesaurus as the source. We included the full list of CDISC values available (29018 distinct concepts).
    • In some cases (14 588 concepts) concept codes are represented as a complex construct from a unique source identifier and CDISC code values (where available) separated by ‘-’.
    • The vocabulary is enriched with synonyms to facilitate the ETL process.
    • All the CDISC concepts are non-standard.
  • Relationships‘ level overview:
    • Mappings are limited to those that can be either algorithmically derived from NCI-metathesaurus tables for clear 1:1 mappings, or curated manually for pre-selected, prioritized ones.

12. ICD Family

  • Overview:
    • In this release, we incorporate external mapping sources, such as SNOMED - ICD mappings and UMLS into the ICD Family Common Data Environment.
    • ICD10, ICD10CM, ICD9CM, ICD10GM, ICD10CN, CIM10 and KCD7 vocabularies have been updated to take into account new mapping candidates.
    • With additional mapping sources integration, we continue mapping harmonization across vocabularies by refactoring groups of concepts and adjusting grouping criteria. Some previously integrated groups have been split to enhance the granularity of mappings.
  • ICD10CM:
    • Has been updated to the latest version (FY2025), effective from October 01, 2024.
    • Relationships’ level overview:
      • Existing mappings have been updated following:
        • SNOMED update
        • Community contribution integration
  • ICD10:
    • Relationships’ level overview:
      • Existing mappings have been updated following the SNOMED update.
  • ICD9CM:
    • Relationships’ level overview:
      • Existing mappings have been updated following the:
        • SNOMED update
        • Community contribution integration
  • ICD10GM:
    • Relationships’ level overview:
      • Existing mappings have been updated following the SNOMED update.
  • ICD10CN:
    • Relationships’ level overview:
      • Existing mappings have been updated following the SNOMED update.
  • KCD7:
    • Relationships’ level overview:
      • Existing mappings have been updated following the SNOMED update.
  • CIM10:
    • Relationships’ level overview:
      • Existing mappings have been updated following the SNOMED update.

13. Community contributions

  • PPI:
    • Concepts’ level overview:
      • Concept class and concept name have been changed for some concepts
  • HCPCS
    • Relationships’ level overview:
      • The mapping of one drug HCPCS code has been improved using the community contribution input.
  • ICD10PCS
    • Relationships’ level overview:
      • Mappings of ten ICD10PCS codes to Standard concepts in the Drug domain have been added.
  • ICD10CM
    • Relationships’ level overview:
      • Mappings have been improved with the help of the community contribution input.
  • ICD9CM
    • Relationships’ level overview:
      • Mappings have been improved with the help of the community contribution input.

14. Community contributions: EDI

  • EDI, the Korean Electronic Data Interchange code system was updated as a part of a community contribution initiative/pipeline.
  • The vocabulary has been updated to the July 2024 version.
    • Source data update was done by Seng Chan You and Yiju Park.
    • The resulting content was integrated by the vocabulary team using the stage table transfer approach.

15. CVX

  • CVX vocabulary has been updated with its CVX 20240515 version.
  • Concepts’ level overview:
    • Three new concepts have been added.

16. RxNorm and RxNorm Extension

  • The vocabulary has been updated to the May 2024 version.

17. VANDF

  • The vocabulary has been updated to the June 2024 version.

18. OMOP Invest Drug

  • The vocabulary has been updated to the June 2024 version.

19. VANDF

  • The vocabulary has been updated to the June 2024 version.

20. NDC/SPL

  • The vocabulary has been updated to the August 2024 version.

21. Co-connect, CIEL, ICD9Proc, OPCS4, UK Biobank

  • We have updated mappings for these vocabularies without changing vocabulary versions

22. OMOP Extension

  • 13 concepts from different clinical areas (extracorporeal circulation, eye tests and pharmacological tests) have been added.

Domain changes

vocabulary_idold_domain_idnew_domain_idcount
CIM10ConditionObservation7
CIM10ObservationCondition21
CIM10ProcedureObservation20
CPT4ObservationMeasurement4
CPT4ProcedureMeasurement25
CPT4ProcedureObservation1
ICD10ConditionObservation8
ICD10ObservationCondition22
ICD10ProcedureObservation20
ICD10CMConditionMeasurement1
ICD10CMConditionObservation16
ICD10CMMeasurementCondition1
ICD10CMObservationCondition63
ICD10CMObservationMeasurement2
ICD10CMObservationProcedure4
ICD10CMProcedureObservation8
ICD10CNConditionObservation18
ICD10CNObservationCondition51
ICD10CNProcedureObservation29
ICD10GMConditionObservation9
ICD10GMObservationCondition20
ICD10GMProcedureObservation23
ICD9CMConditionMeasurement6
ICD9CMConditionObservation232
ICD9CMObservationCondition18
ICD9CMProcedureMeasurement3
ICD9CMProcedureObservation11
KCD7ConditionObservation10
KCD7ObservationCondition28
KCD7ProcedureObservation20
LOINCMeasurementObservation1
SNOMEDConditionMeasurement3
SNOMEDConditionObservation64
SNOMEDDeviceDrug8
SNOMEDDeviceObservation20
SNOMEDDrugDevice5
SNOMEDDrugObservation27
SNOMEDMeasurementCondition3
SNOMEDMeasurementMeas Value10
SNOMEDMeasurementObservation9
SNOMEDMeasurementProcedure7
SNOMEDMeas ValueObservation1
SNOMEDObservationCondition203
SNOMEDObservationDevice8
SNOMEDObservationDrug58
SNOMEDObservationMeasurement38
SNOMEDObservationMeas Value2
SNOMEDObservationProcedure34
SNOMEDObservationRelationship1
SNOMEDProcedureMeasurement89
SNOMEDProcedureObservation125
SNOMEDProviderObservation2

Newly added concepts grouped by Vocabulary_id and Domain

vocabulary_iddomain_idcount
ATCDrug391
CDISCCondition455
CDISCDevice208
CDISCGeography274
CDISCMeasurement8158
CDISCObservation16857
CDISCProcedure619
CDISCProvider39
CDISCSpec Anatomic Site1792
CDISCUnit616
CMS Place of ServiceVisit3
CPT4Drug16
CPT4Measurement87
CPT4Observation10
CPT4Procedure169
CPT4Visit1
CVXDrug3
EDIDevice16383
EDIDrug38833
EDIProcedure69160
HCPCSDevice52
HCPCSDrug60
HCPCSObservation3
HCPCSProcedure16
ICD10CMCondition250
ICD10CMMeasurement5
ICD10CMObservation32
ICD10CMProcedure4
LOINCMeasurement775
LOINCMeas Value204
LOINCNote60
LOINCObservation744
LOINCProcedure106
MedDRACondition462
MedDRAMeasurement98
MedDRAObservation23
MedDRAProcedure171
NDCDevice220
NDCDrug24641
OMOP ExtensionMeasurement5
OMOP ExtensionObservation8
OMOP Invest DrugDrug1640
RxNormDrug961
RxNorm ExtensionDrug1620
SNOMEDCondition2097
SNOMEDDevice94
SNOMEDDrug338
SNOMEDGeography2
SNOMEDMeasurement333
SNOMEDMeas Value63
SNOMEDObservation892
SNOMEDProcedure430
SNOMEDProvider8
SNOMEDSpec Anatomic Site597
SNOMEDSpecimen3
SNOMEDType Concept5
SNOMEDUnit4
SPLDrug33628
UCUMUnit7
VANDFDevice285
VANDFDrug471
VisitVisit1

Standard concept changes

vocabulary_idold_standard_conceptnew_standard_conceptcount
ATCClassification with mappingNon-standard with mapping78
ATCClassification without mappingNon-standard with mapping7
ATCClassification without mappingNon-standard without mapping2
CMS Place of ServiceStandardNon-standard with mapping1
CPT4StandardNon-standard with mapping160
HCPCSNon-standard without mappingStandard5
ICD10PCSStandardNon-standard with mapping10
LOINCStandardNon-standard with mapping11
LOINCClassification without mappingNon-standard without mapping6
LOINCNon-standard without mappingClassification without mapping1
MedDRANon-standard without mappingClassification with mapping3103
MedDRAClassification with mappingNon-standard with mapping1
RxNormStandardNon-standard without mapping338
RxNormClassification without mappingNon-standard without mapping66
RxNormStandardNon-standard with mapping6
SNOMEDStandardNon-standard with mapping1098
SNOMEDStandardNon-standard without mapping582
SNOMEDNon-standard with mappingStandard166
SNOMEDNon-standard without mappingStandard9
SPLClassification without mappingNon-standard without mapping6
SPLClassification without mappingNon-standard with mapping2
SPLClassification with mappingNon-standard with mapping2
SPLNon-standard without mappingClassification without mapping1
SPLNon-standard with mappingClassification without mapping1
VANDFStandardNon-standard without mapping171
VANDFNon-standard without mappingStandard7

Newly added concepts and their standard concept status

vocabulary_idnew_standard_conceptcount
ATCNon-standard with mapping6
ATCClassification without mapping40
ATCClassification with mapping345
CDISCNon-standard with mapping5509
CDISCNon-standard without mapping23509
CMS Place of ServiceNon-standard with mapping1
CMS Place of ServiceStandard2
CPT4Non-standard with mapping28
CPT4Classification without mapping42
CPT4Standard213
CVXNon-standard with mapping1
CVXStandard2
EDINon-standard without mapping317
EDINon-standard with mapping124059
HCPCSNon-standard with mapping61
HCPCSStandard70
ICD10CMNon-standard with mapping291
LOINCClassification without mapping274
LOINCNon-standard without mapping580
LOINCStandard1035
MedDRAClassification without mapping1
MedDRANon-standard without mapping753
NDCStandard212
NDCNon-standard without mapping9754
NDCNon-standard with mapping14895
OMOP ExtensionStandard13
OMOP Invest DrugNon-standard with mapping1640
RxNormNon-standard with mapping28
RxNormNon-standard without mapping56
RxNormClassification without mapping134
RxNormStandard743
RxNorm ExtensionStandard1620
SNOMEDNon-standard with mapping137
SNOMEDNon-standard without mapping371
SNOMEDStandard4375
SPLNon-standard without mapping2
SPLClassification without mapping33626
UCUMStandard7
VANDFNon-standard without mapping90
VANDFStandard279
VANDFNon-standard with mapping387
VisitStandard1
VocabularyNon-standard without mapping1

Changes of concept mapping status grouped by target domain

vocabulary_idOld target Domain/StatusNew target Domain/Statuscount
AMISDrugNo mapping1
AMTDrugNo mapping4
ATCDrugNo mapping1
ATCNew conceptDrug351
ATCNo mappingDrug47
BDPMDrugNo mapping8
CAPMeasurementMeas Value5
CAPObservationNo mapping2
CDISCNew conceptCondition224
CDISCNew conceptDevice12
CDISCNew conceptDrug28
CDISCNew conceptGender2
CDISCNew conceptGeography198
CDISCNew conceptMeasurement900
CDISCNew conceptMeas Value164
CDISCNew conceptObservation2321
CDISCNew conceptProcedure200
CDISCNew conceptProvider22
CDISCNew conceptRace28
CDISCNew conceptRelationship34
CDISCNew conceptRoute80
CDISCNew conceptSpec Anatomic Site1022
CDISCNew conceptSpecimen6
CDISCNew conceptUnit268
CIELConditionDrug1
CIELConditionNo mapping27
CIELConditionObservation2
CIELCondition/DrugDrug15
CIELCondition/Drug/ObservationDrug1
CIELCondition/Drug/ObservationDrug/Observation1
CIELDevice/DrugDrug3
CIELDrugNo mapping1
CIELMeasurementNo mapping1
CIELNo mappingUnit3
CIELObservationCondition38
CIELObservationMeasurement1
CIELObservationNo mapping5
CIELProcedureMeasurement6
CIELProcedureObservation3
CIM10ConditionCondition/Observation1
CIM10ConditionObservation4
CIM10Condition/ObservationCondition1
CIM10Condition/ObservationObservation3
CIM10ObservationCondition20
CIM10ObservationCondition/Observation1
CIM10Observation/ProcedureObservation2
CIM10ProcedureObservation20
CMS Place of ServiceNew conceptVisit3
CO-CONNECT TWINSNo mappingObservation1
CPT4New conceptDrug16
CPT4New conceptMeasurement84
CPT4New conceptObservation8
CPT4New conceptProcedure132
CPT4New conceptVisit1
CPT4No mappingProcedure1
CPT4ObservationMeasurement4
CPT4Observation/ProcedureMeasurement/Procedure1
CPT4ProcedureCondition/Procedure1
CPT4ProcedureMeasurement32
CPT4ProcedureObservation4
CPT4Procedure/VisitVisit1
CPT4VisitProcedure/Visit3
CVXNew conceptDrug3
dm+dDrugNo mapping3
EDIConditionProcedure3
EDIMeasurementProcedure6
EDIMeas ValueProcedure10
EDINew conceptDevice16381
EDINew conceptDrug38834
EDINew conceptMeasurement559
EDINew conceptMeasurement/Procedure30
EDINew conceptProcedure68255
EDINo mappingCondition9
EDINo mappingDevice19458
EDINo mappingDrug23205
EDINo mappingMeasurement1696
EDINo mappingMeasurement/Procedure110
EDINo mappingObservation95
EDINo mappingProcedure205389
EDIObservationProcedure15
EDISpec Anatomic SiteProcedure13
EDISpecimenProcedure3
GCN_SEQNODrugNo mapping71
GemscriptDrugNo mapping2
GPIDrugNo mapping9
HCPCSNew conceptDevice52
HCPCSNew conceptDrug60
HCPCSNew conceptObservation2
HCPCSNew conceptProcedure17
HCPCSNo mappingObservation1
HCPCSNo mappingProcedure4
HCPCSObservation/VisitProcedure/Visit1
HCPCSProcedureMeasurement1
HCPCSProcedure/VisitObservation/Visit3
HCPCSProcedure/VisitVisit3
HemOncConditionNo mapping2
ICD10ConditionCondition/Measurement1
ICD10ConditionCondition/Observation4
ICD10ConditionObservation6
ICD10Condition/MeasurementMeasurement4
ICD10Condition/ObservationCondition1
ICD10Condition/ObservationObservation3
ICD10MeasurementCondition2
ICD10ObservationCondition21
ICD10ObservationCondition/Observation1
ICD10ProcedureObservation20
ICD10CMConditionCondition/Measurement6
ICD10CMConditionCondition/Observation2
ICD10CMConditionObservation23
ICD10CMCondition/MeasurementMeasurement5
ICD10CMCondition/Meas ValueCondition7
ICD10CMCondition/ObservationCondition19
ICD10CMCondition/ObservationObservation4
ICD10CMMeasurementCondition4
ICD10CMMeasurementCondition/Observation3
ICD10CMMeas Value/ObservationCondition1
ICD10CMNew conceptCondition249
ICD10CMNew conceptCondition/Observation1
ICD10CMNew conceptMeasurement5
ICD10CMNew conceptObservation32
ICD10CMNew conceptProcedure4
ICD10CMNo mappingCondition9
ICD10CMNo mappingObservation19
ICD10CMObservationCondition59
ICD10CMObservationCondition/Observation4
ICD10CMObservationMeasurement2
ICD10CMObservationProcedure4
ICD10CMObservation/ProcedureObservation1
ICD10CMProcedureObservation8
ICD10CNConditionCondition/Observation2
ICD10CNConditionObservation11
ICD10CNCondition/MeasurementMeasurement6
ICD10CNCondition/ObservationCondition5
ICD10CNCondition/ObservationObservation7
ICD10CNObservationCondition49
ICD10CNObservationCondition/Observation2
ICD10CNObservation/ProcedureObservation1
ICD10CNProcedureObservation29
ICD10GMConditionObservation4
ICD10GMCondition/MeasurementMeasurement10
ICD10GMCondition/ObservationCondition1
ICD10GMCondition/ObservationObservation5
ICD10GMObservationCondition19
ICD10GMObservation/ProcedureObservation2
ICD10GMProcedureObservation23
ICD10PCSProcedureDrug10
ICD9CMConditionCondition/Measurement2
ICD9CMConditionCondition/Observation1
ICD9CMConditionMeasurement3
ICD9CMConditionObservation3
ICD9CMCondition/MeasurementCondition165
ICD9CMCondition/MeasurementCondition/Observation3
ICD9CMCondition/MeasurementMeasurement2
ICD9CMCondition/ObservationCondition11
ICD9CMCondition/ObservationObservation228
ICD9CMCondition/ProcedureCondition2
ICD9CMObservationCondition17
ICD9CMObservationCondition/Observation1
ICD9CMProcedureMeasurement3
ICD9CMProcedureObservation11
ICD9ProcNo mappingDrug24
ICD9ProcProcedureMeasurement3
ICD9ProcProcedureNo mapping2
ICD9ProcProcedureObservation4
ICD9ProcCNProcedureMeasurement7
ICD9ProcCNProcedureNo mapping44
ICD9ProcCNProcedureObservation9
ICDO3ConditionNo mapping3
ICDO3ObservationNo mapping2
KCD7ConditionCondition/Observation1
KCD7ConditionObservation4
KCD7Condition/ObservationCondition1
KCD7Condition/ObservationObservation3
KCD7ObservationCondition20
KCD7ObservationCondition/Observation1
KCD7Observation/ProcedureObservation2
KCD7ProcedureObservation20
LOINCNew conceptMeasurement533
LOINCNew conceptMeas Value204
LOINCNew conceptNote58
LOINCNew conceptObservation157
LOINCNew conceptProcedure83
MedDRAConditionCondition/Measurement53
MedDRAConditionCondition/Observation2
MedDRAConditionMeasurement1
MedDRAConditionNo mapping1
MedDRAConditionObservation1
MedDRACondition/ObservationCondition4
MedDRACondition/ProcedureCondition1
MedDRACondition/ProcedureProcedure1
MedDRAMeasurementCondition4
MedDRAMeasurementCondition/Measurement7
MedDRAMeasurementObservation5
MedDRAMeas ValueProcedure1
MedDRAMeas Value/ProcedureProcedure1
MedDRANo mappingCondition1292
MedDRANo mappingCondition/Measurement363
MedDRANo mappingCondition/Observation16
MedDRANo mappingCondition/Procedure16
MedDRANo mappingDrug/Procedure2
MedDRANo mappingMeasurement594
MedDRANo mappingMeasurement/Observation1
MedDRANo mappingMeasurement/Procedure8
MedDRANo mappingObservation193
MedDRANo mappingObservation/Procedure6
MedDRANo mappingProcedure616
MedDRANo mappingRelationship1
MedDRAObservationCondition55
MedDRAObservationMeasurement2
MedDRAObservationMeasurement/Observation1
MedDRAObservationObservation/Procedure1
MedDRAObservationProcedure3
MedDRAProcedureCondition1
MedDRAProcedureMeasurement14
MedDRAProcedureObservation1
MedDRASpec Anatomic SiteCondition1
MeSHConditionNo mapping3
MeSHObservationCondition2
MeSHProcedureMeasurement5
MeSHProcedureNo mapping2
MeSHProcedureObservation1
MultumDrugNo mapping3
NDCDrugNo mapping205
NDCNew conceptDevice212
NDCNew conceptDrug14895
NDCNo mappingDrug2419
NDFRTDrugNo mapping19
Nebraska LexiconConditionNo mapping91
Nebraska LexiconConditionObservation12
Nebraska LexiconDeviceDrug1
Nebraska LexiconDeviceNo mapping16
Nebraska LexiconDevice/DrugDrug5
Nebraska LexiconDrugNo mapping1
Nebraska LexiconDrug/ObservationDrug2
Nebraska LexiconGeographyNo mapping17
Nebraska LexiconMeasurementMeas Value15
Nebraska LexiconMeasurementNo mapping23
Nebraska LexiconMeasurementProcedure5
Nebraska LexiconMeas ValueNo mapping1
Nebraska LexiconObservationCondition122
Nebraska LexiconObservationDevice1
Nebraska LexiconObservationMeasurement6
Nebraska LexiconObservationNo mapping429
Nebraska LexiconObservationProcedure28
Nebraska LexiconProcedureMeasurement121
Nebraska LexiconProcedureNo mapping304
Nebraska LexiconProcedureObservation91
Nebraska LexiconSpec Anatomic SiteNo mapping31
OMOP ExtensionNew conceptMeasurement5
OMOP ExtensionNew conceptObservation8
OMOP Invest DrugNew conceptDrug1640
OMOP Invest DrugNo mappingDrug106
OPCS4MeasurementProcedure1
OPCS4ObservationProcedure2
OPCS4ProcedureMeasurement4
OPSMeasurement/ProcedureMeasurement1
OPSObservationProcedure1
OPSProcedureMeasurement5
OPSProcedureNo mapping113
OXMISConditionNo mapping4
OXMISConditionObservation1
OXMISObservationCondition1
OXMISObservationNo mapping3
OXMISProcedureMeasurement9
OXMISProcedureNo mapping3
OXMISProcedureObservation3
PCORNetDeviceNo mapping2
PPIObservationCondition1
ReadConditionNo mapping34
ReadConditionObservation2
ReadCondition/ObservationObservation1
ReadMeasurementCondition5
ReadMeasurementNo mapping9
ReadMeasurementObservation2
ReadMeasurementProcedure2
ReadMeasurement/ObservationMeasurement2
ReadMeas ValueMeasurement1
ReadNo mappingCondition2
ReadNo mappingObservation4
ReadObservationCondition30
ReadObservationMeasurement1
ReadObservationNo mapping191
ReadObservationProcedure10
ReadProcedureMeasurement48
ReadProcedureNo mapping120
ReadProcedureObservation44
ReadProcedureObservation/Procedure1
RxNormDrugNo mapping384
RxNormNew conceptDrug771
RxNorm ExtensionDrugNo mapping5
RxNorm ExtensionNew conceptDrug1620
SNOMEDConditionNo mapping146
SNOMEDConditionObservation26
SNOMEDConditionProcedure1
SNOMEDCondition/MeasurementCondition2
SNOMEDCondition/MeasurementMeasurement1
SNOMEDCondition/ObservationCondition38
SNOMEDCondition/ObservationObservation4
SNOMEDCondition/ProcedureCondition1
SNOMEDCondition/ProcedureProcedure8
SNOMEDDeviceDrug9
SNOMEDDeviceNo mapping16
SNOMEDDevice/DrugDrug14
SNOMEDDrugDrug/Procedure1
SNOMEDDrugNo mapping5
SNOMEDDrug/MeasurementMeasurement1
SNOMEDDrug/ObservationDrug8
SNOMEDDrug/ObservationObservation4
SNOMEDDrug/ProcedureProcedure10
SNOMEDMeasurementCondition/Measurement8
SNOMEDMeasurementMeasurement/Observation1
SNOMEDMeasurementMeas Value15
SNOMEDMeasurementNo mapping47
SNOMEDMeasurementObservation10
SNOMEDMeasurementProcedure5
SNOMEDMeasurement/Meas ValueMeasurement4
SNOMEDMeasurement/ObservationMeasurement3
SNOMEDMeasurement/ObservationObservation1
SNOMEDMeasurement/ProcedureMeasurement1
SNOMEDMeasurement/ProcedureProcedure1
SNOMEDMeas ValueMeasurement1
SNOMEDMeas ValueNo mapping1
SNOMEDMeas Value/ObservationObservation1
SNOMEDNew conceptCondition2097
SNOMEDNew conceptDevice94
SNOMEDNew conceptDrug21
SNOMEDNew conceptMeasurement333
SNOMEDNew conceptMeas Value63
SNOMEDNew conceptObservation865
SNOMEDNew conceptProcedure428
SNOMEDNew conceptProvider7
SNOMEDNew conceptSpec Anatomic Site597
SNOMEDNew conceptSpecimen3
SNOMEDNew conceptUnit4
SNOMEDNo mappingCondition128
SNOMEDNo mappingDrug1442
SNOMEDNo mappingMeasurement8
SNOMEDNo mappingObservation371
SNOMEDNo mappingProcedure23
SNOMEDNo mappingRoute4
SNOMEDNo mappingSpec Anatomic Site2
SNOMEDNo mappingUnit2
SNOMEDObservationCondition199
SNOMEDObservationDevice1
SNOMEDObservationDrug119
SNOMEDObservationMeasurement39
SNOMEDObservationMeas Value2
SNOMEDObservationNo mapping502
SNOMEDObservationProcedure35
SNOMEDObservation/ProcedureObservation8
SNOMEDProcedureDrug2
SNOMEDProcedureDrug/Procedure1
SNOMEDProcedureMeasurement156
SNOMEDProcedureNo mapping436
SNOMEDProcedureObservation179
SNOMEDSpec Anatomic SiteNo mapping30
SPLDrugNo mapping7
SPLNo mappingDrug2
SUSProcedureMeasurement5
SUSProcedureNo mapping8
SUSProcedureObservation7
UCUMNew conceptUnit7
UK BiobankProcedureMeasurement1
VANDFDeviceNo mapping171
VANDFDrugNo mapping3
VANDFNew conceptDevice279
VANDFNew conceptDrug387
VANDFNo mappingDevice7
VANDFNo mappingDrug7
VisitNew conceptVisit1

New vocabularies added

vocabulary_id
CDISC

New vocabulary dependencies

source vocabulary_idtarget vocabulary_idcount
CDISCABMS3
CDISCGender2
CDISCHES Specialty1
CDISCLOINC67
CDISCMedicare Specialty13
CDISCNUCC4
CDISCOMOP Extension6
CDISCOSM17
CDISCProvider1
CDISCRace28
CDISCRxNorm23
CDISCRxNorm Extension5
CDISCSNOMED5071
CDISCUCUM268
EDILOINC1664
EDIRxNorm Extension57148
ICD9ProcCVX18
SNOMEDOSM17

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