diff --git a/reposerver/repository/repository.go b/reposerver/repository/repository.go
index f66bc71ac4621..46807d7d36a4b 100644
--- a/reposerver/repository/repository.go
+++ b/reposerver/repository/repository.go
@@ -1374,7 +1374,10 @@ func GenerateManifests(ctx context.Context, appPath, repoRoot, revision string,
 			kustomizeBinary = q.KustomizeOptions.BinaryPath
 		}
 		k := kustomize.NewKustomizeApp(appPath, q.Repo.GetGitCreds(gitCredsStore), repoURL, kustomizeBinary)
-		targetObjs, _, err = k.Build(q.ApplicationSource.Kustomize, q.KustomizeOptions, env)
+		targetObjs, _, err = k.Build(q.ApplicationSource.Kustomize, q.KustomizeOptions, env, &kustomize.BuildOpts{
+			KubeVersion: q.KubeVersion,
+			APIVersions: q.ApiVersions,
+		})
 	case v1alpha1.ApplicationSourceTypePlugin:
 		pluginName := ""
 		if q.ApplicationSource.Plugin != nil {
@@ -2115,7 +2118,7 @@ func populateKustomizeAppDetails(res *apiclient.RepoAppDetailsResponse, q *apicl
 		ApplicationSource: q.Source,
 	}
 	env := newEnv(&fakeManifestRequest, reversion)
-	_, images, err := k.Build(q.Source.Kustomize, q.KustomizeOptions, env)
+	_, images, err := k.Build(q.Source.Kustomize, q.KustomizeOptions, env, nil)
 	if err != nil {
 		return err
 	}
diff --git a/util/kustomize/kustomize.go b/util/kustomize/kustomize.go
index 2487b14b4903b..e44252a520eea 100644
--- a/util/kustomize/kustomize.go
+++ b/util/kustomize/kustomize.go
@@ -28,10 +28,15 @@ import (
 // represents a Docker image in the format NAME[:TAG].
 type Image = string
 
+type BuildOpts struct {
+	KubeVersion string
+	APIVersions []string
+}
+
 // Kustomize provides wrapper functionality around the `kustomize` command.
 type Kustomize interface {
 	// Build returns a list of unstructured objects from a `kustomize build` command and extract supported parameters
-	Build(opts *v1alpha1.ApplicationSourceKustomize, kustomizeOptions *v1alpha1.KustomizeOptions, envVars *v1alpha1.Env) ([]*unstructured.Unstructured, []Image, error)
+	Build(opts *v1alpha1.ApplicationSourceKustomize, kustomizeOptions *v1alpha1.KustomizeOptions, envVars *v1alpha1.Env, buildOpts *BuildOpts) ([]*unstructured.Unstructured, []Image, error)
 }
 
 // NewKustomizeApp create a new wrapper to run commands on the `kustomize` command-line tool.
@@ -85,7 +90,7 @@ func mapToEditAddArgs(val map[string]string) []string {
 	return args
 }
 
-func (k *kustomize) Build(opts *v1alpha1.ApplicationSourceKustomize, kustomizeOptions *v1alpha1.KustomizeOptions, envVars *v1alpha1.Env) ([]*unstructured.Unstructured, []Image, error) {
+func (k *kustomize) Build(opts *v1alpha1.ApplicationSourceKustomize, kustomizeOptions *v1alpha1.KustomizeOptions, envVars *v1alpha1.Env, buildOpts *BuildOpts) ([]*unstructured.Unstructured, []Image, error) {
 
 	env := os.Environ()
 	if envVars != nil {
@@ -293,13 +298,11 @@ func (k *kustomize) Build(opts *v1alpha1.ApplicationSourceKustomize, kustomizeOp
 		}
 	}
 
-	var cmd *exec.Cmd
-	if kustomizeOptions != nil && kustomizeOptions.BuildOptions != "" {
-		params := parseKustomizeBuildOptions(k.path, kustomizeOptions.BuildOptions)
-		cmd = exec.Command(k.getBinaryPath(), params...)
-	} else {
-		cmd = exec.Command(k.getBinaryPath(), "build", k.path)
+	buildOptions := ""
+	if kustomizeOptions != nil {
+		buildOptions = kustomizeOptions.BuildOptions
 	}
+	cmd := exec.Command(k.getBinaryPath(), parseKustomizeBuildOptions(k.path, buildOptions, buildOpts)...)
 	cmd.Env = env
 	out, err := executil.Run(cmd)
 	if err != nil {
@@ -314,8 +317,25 @@ func (k *kustomize) Build(opts *v1alpha1.ApplicationSourceKustomize, kustomizeOp
 	return objs, getImageParameters(objs), nil
 }
 
-func parseKustomizeBuildOptions(path, buildOptions string) []string {
-	return append([]string{"build", path}, strings.Split(buildOptions, " ")...)
+func parseKustomizeBuildOptions(kustomizePath string, buildOptions string, buildOpts *BuildOpts) []string {
+	buildOptsParams := []string{"build", kustomizePath}
+	if buildOpts != nil && getSemverSafe().GreaterThan(semver.MustParse("v5.3.0")) && isHelmEnabled(buildOptions) {
+		if buildOpts.KubeVersion != "" {
+			buildOptsParams = append(buildOptsParams, "--helm-kube-version", buildOpts.KubeVersion)
+		}
+		for _, v := range buildOpts.APIVersions {
+			buildOptsParams = append(buildOptsParams, "--helm-api-versions", v)
+		}
+	}
+	if buildOptions != "" {
+		buildOptsParams = append(buildOptsParams, strings.Split(buildOptions, " ")...)
+	}
+
+	return buildOptsParams
+}
+
+func isHelmEnabled(buildOptions string) bool {
+	return strings.Contains(buildOptions, "--enable-helm")
 }
 
 var KustomizationNames = []string{"kustomization.yaml", "kustomization.yml", "Kustomization"}
diff --git a/util/kustomize/kustomize_test.go b/util/kustomize/kustomize_test.go
index a6275cf01ae1b..98f9438c200ae 100644
--- a/util/kustomize/kustomize_test.go
+++ b/util/kustomize/kustomize_test.go
@@ -69,7 +69,9 @@ func TestKustomizeBuild(t *testing.T) {
 			},
 		},
 	}
-	objs, images, err := kustomize.Build(&kustomizeSource, nil, env)
+	objs, images, err := kustomize.Build(&kustomizeSource, nil, env, &BuildOpts{
+		KubeVersion: "1.27", APIVersions: []string{"foo", "bar"},
+	})
 	assert.Nil(t, err)
 	if err != nil {
 		assert.Equal(t, len(objs), 2)
@@ -132,7 +134,7 @@ func TestFailKustomizeBuild(t *testing.T) {
 			},
 		},
 	}
-	_, _, err = kustomize.Build(&kustomizeSource, nil, nil)
+	_, _, err = kustomize.Build(&kustomizeSource, nil, nil, nil)
 	assert.EqualError(t, err, "expected integer value for count. Received: garbage")
 }
 
@@ -156,10 +158,25 @@ func TestIsKustomization(t *testing.T) {
 }
 
 func TestParseKustomizeBuildOptions(t *testing.T) {
-	built := parseKustomizeBuildOptions("guestbook", "-v 6 --logtostderr")
+	built := parseKustomizeBuildOptions("guestbook", "-v 6 --logtostderr", &BuildOpts{
+		KubeVersion: "1.27", APIVersions: []string{"foo", "bar"},
+	})
+	// Helm is not enabled so helm options are not in the params
 	assert.Equal(t, []string{"build", "guestbook", "-v", "6", "--logtostderr"}, built)
 }
 
+func TestParseKustomizeBuildHelmOptions(t *testing.T) {
+	built := parseKustomizeBuildOptions("guestbook", "-v 6 --logtostderr --enable-helm", &BuildOpts{
+		KubeVersion: "1.27",
+		APIVersions: []string{"foo", "bar"},
+	})
+	assert.Equal(t, []string{
+		"build", "guestbook",
+		"--helm-kube-version", "1.27", "--helm-api-versions", "foo", "--helm-api-versions",
+		"bar", "-v", "6", "--logtostderr",
+	}, built)
+}
+
 func TestVersion(t *testing.T) {
 	ver, err := Version(false)
 	assert.NoError(t, err)
@@ -223,7 +240,7 @@ func TestKustomizeBuildForceCommonLabels(t *testing.T) {
 		appPath, err := testDataDir(t, tc.TestData)
 		assert.Nil(t, err)
 		kustomize := NewKustomizeApp(appPath, git.NopCreds{}, "", "")
-		objs, _, err := kustomize.Build(&tc.KustomizeSource, nil, tc.Env)
+		objs, _, err := kustomize.Build(&tc.KustomizeSource, nil, tc.Env, nil)
 		switch tc.ExpectErr {
 		case true:
 			assert.Error(t, err)
@@ -315,7 +332,7 @@ func TestKustomizeBuildForceCommonAnnotations(t *testing.T) {
 		appPath, err := testDataDir(t, tc.TestData)
 		assert.Nil(t, err)
 		kustomize := NewKustomizeApp(appPath, git.NopCreds{}, "", "")
-		objs, _, err := kustomize.Build(&tc.KustomizeSource, nil, tc.Env)
+		objs, _, err := kustomize.Build(&tc.KustomizeSource, nil, tc.Env, nil)
 		switch tc.ExpectErr {
 		case true:
 			assert.Error(t, err)
@@ -341,7 +358,7 @@ func TestKustomizeCustomVersion(t *testing.T) {
 	env := &v1alpha1.Env{
 		&v1alpha1.EnvEntry{Name: "ARGOCD_APP_NAME", Value: "argo-cd-tests"},
 	}
-	objs, images, err := kustomize.Build(&kustomizeSource, nil, env)
+	objs, images, err := kustomize.Build(&kustomizeSource, nil, env, nil)
 	assert.Nil(t, err)
 	if err != nil {
 		assert.Equal(t, len(objs), 2)
@@ -361,7 +378,7 @@ func TestKustomizeBuildComponents(t *testing.T) {
 	kustomizeSource := v1alpha1.ApplicationSourceKustomize{
 		Components: []string{"./components"},
 	}
-	objs, _, err := kustomize.Build(&kustomizeSource, nil, nil)
+	objs, _, err := kustomize.Build(&kustomizeSource, nil, nil, nil)
 	assert.Nil(t, err)
 	obj := objs[0]
 	assert.Equal(t, "nginx-deployment", obj.GetName())
@@ -394,7 +411,7 @@ func TestKustomizeBuildPatches(t *testing.T) {
 			},
 		},
 	}
-	objs, _, err := kustomize.Build(&kustomizeSource, nil, nil)
+	objs, _, err := kustomize.Build(&kustomizeSource, nil, nil, nil)
 	assert.Nil(t, err)
 	obj := objs[0]
 	containers, found, err := unstructured.NestedSlice(obj.Object, "spec", "template", "spec", "containers")