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Supplemental.embl
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CC ****************************************************************
CC *
CC RepeatMasker Supplemental Sequence Database *
CC *
CC Prepared by: Smit, A., Hubley, R. *
CC See accompanying README.html/README.txt for details. *
CC *
CC RELEASE 20200624; *
CC *
CC This includes sequences known to be Artefacts created in *
CC older DNA sequencing methods as well as variants of Dfam *
CC sequences that act as search decoys to improve annotation *
CC quality. *
CC *
CC RepeatMasker software and database development and *
CC maintenance are currently funded by an NIH/NHGRI *
CC R01 grant HG02939-01 to Arian Smit. *
CC *
CC ****************************************************************
XX
ID IS1 repeatmasker; DNA; ???; 768 BP.
CC IS1 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 768 BP; 178 A; 194 C; 215 G; 181 T; 0 other;
ggtgatgctg ccaacttact gatttagtgt atgatggtgt ttttgaggtg ctccagtggc 60
ttctgtttct atcagctgtc cctcctgttc agctactgac ggggtggtgc gtaacggcaa 120
aagcaccgcc ggacatcagc gctatctctg ctctcactgc cgtaaaacat ggcaactgca 180
gttcacttac accgcttctc aacccggtac gcaccagaaa atcattgata tggccatgaa 240
tggcgttgga tgccgggcaa cagcccgcat tatgggcgtt ggcctcaaca cgattttacg 300
tcacttaaaa aactcaggcc gcagtcggta acctcgcgca tacagccggg cagtgacgtc 360
atcgtctgcg cggaaatgga cgaacagtgg ggctatgtcg gggctaaatc gcgccagcgc 420
tggctgtttt acgcgtatga cagtctccgg aagacggttg ttgcgcacgt attcggtgaa 480
cgcactatgg cgacgctggg gcgtcttatg agcctgctgt caccctttga cgtggtgata 540
tggatgacgg atggctggcc gctgtatgaa tcccgcctga agggaaagct gcacgtaatc 600
agcaagcgat atacgcagcg aattgagcgg cataacctga atctgaggca gcacctggca 660
cggctgggac ggaagtcgct gtcgttctca aaatcggtgg agctgcatga caaagtcatc 720
gggcattatc tgaacataaa acactatcaa taagttggag tcattacc 768
//
ID IS2 repeatmasker; DNA; ???; 1331 BP.
CC IS2 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
CC Description: reversed oct 13 2004
XX
SQ Sequence 1331 BP; 341 A; 317 C; 389 G; 284 T; 0 other;
tagactggcc ccctgaatct ccagacaacc aatatcactt aaataagtga tagtcttaat 60
actagttttt agactagtca ttggagaaca gatgattgat gtcttagggc cggagaaacg 120
cagacggcgt accacacagg aaaagatcgc aattgttcag cagagctttg aaccggggat 180
gacggtctcc ctcgttgccc ggcaacatgg tgtagcagcc agccagttat ttctctggcg 240
taagcaatac caggaaggaa gtcttactgc tgtcgccgcc ggagaacagg ttgttcctgc 300
ctctgaactt gctgccgcca tgaagcagat taaagaactc cagcgcctgc tcggcaagaa 360
aacgatggaa aatgaactcc tcaaagaagc cgttgaatat ggacgggcaa aaaagtggat 420
agcgcacgcg cccttattgc ccggggatgg ggagtaagct tagtcagccg ttgtctccgg 480
gtgtcgcgtg cgcagttgca cgtcattctc agacgaaccg atgactggat ggatggccgc 540
cgcagtcgtc acactgatga tacggatgtg cttctccgta tacaccatgt tatcggagag 600
ctgccaacgt atggttatcg tcgggtatgg gcgctgcttc gcagacaggc agaacttgat 660
ggtatgcctg cgatcaatgc caaacgtgtt taccggatca tgcgccagaa tgcgctgttg 720
cttgagcgaa aacctgctgt accgccatcg aaacgggcac atacaggcag agtggccgtg 780
aaagaaagca atcagcgatg gtgctctgac gggttcgagt tctgctgtga taacggagag 840
agactgcgtg tcacgttcgc gctggactgc tgtgatcgtg aggcactgca ctgggcggtc 900
actaccggcg gcttcaacag tgaaacagta caggacgtca tgctgggagc ggtggaacgc 960
cgcttcggca acgatcttcc gtcgtctcca gtggagtggc tgacggataa tggttcatgc 1020
taccgggcta atgaaacacg ccagttcgcc cggatgttgg gacttgaacc gaagaacacg 1080
gcggtgcgga gtccggagag taacggaata gcagagagct tcgtgaaaac gataaagcgt 1140
gactacatca gtatcatgcc caaaccagac gggttaacgg cagcaaagaa ccttgcagag 1200
gcgttcgagc attataacga atggcatccg catagtgcgc tgggttatcg ctcgccacgg 1260
gaatatctgc ggcagcgggc ttgtaatggg ttaagtgata acagatgtct ggaaatatag 1320
gggcaaatcc a 1331
//
ID IS3 repeatmasker; DNA; ???; 1258 BP.
CC IS3 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
CC Description: reversed oct 13 2004
XX
SQ Sequence 1258 BP; 320 A; 321 C; 353 G; 264 T; 0 other;
tgatcttacc cagcaatagt ggacacgcgg ctaagtgagt aaactctcag tcagaggtga 60
ctcacatgac aaaaacagta tcaaccagta aaaaaccccg taaacagcat tcgcctgaat 120
ttcgcagtga agccctgaag cttgctgaac gcatcggtgt tactgccgca gcccgtgaac 180
tcagcctgta tgaatcacaa ctctacaact ggcgcagtaa acagcaaaat cagcagacgt 240
cttctgaacg tgaactggag atgtctaccg agattgcacg tctcaaacgc cagctggcag 300
aacgggatga agagctggct atcctccaaa aggccgcgac atacttcgcg aagcgcctga 360
aatgaagtat gtctttattg aaaaacatca ggctgagttc agcatcaaag caatgtgccg 420
cgtgctccgg gtggcccgca gcggctggta tacgtggtgt cagcggcgga caaggataag 480
cacgcgtcag cagttccgcc aacactgcga cagcgttgtc ctcgcggctt ttacccggtc 540
aaaacagcgt tacggtgccc cacgcctgac ggatgaactg cgtgctcagg gttacccctt 600
taacgtaaaa accgtggcgg caagcctgcg ccgtcaggga ctgagggcaa aggcctcccg 660
gaagttcagc ccggtcagct accgcgcaca cggcctgcct gtgtcagaaa atctgttgga 720
gcaggatttt tacgccagtg gcccgaacca gaagtgggca ggagacatca cgtacttacg 780
tacagatgaa ggctggctgt atctggcagt ggtcattgac ctgtggtcac gtgccgttat 840
tggctggtca atgtcgccac gcatgacggc gcaactggcc tgcgatgccc tgcagatggc 900
gctgtggcgg cgtaagaggc cccggaacgt tatcgttcac acggaccgtg gaggccagta 960
ctgttcagca gattatcagg cgcaactgaa gcggcataat ctgcgtggaa gtatgagcgc 1020
aaaaggttgc tgctacgata atgcctgcgt ggaaagcttc tttcattcgc tgaaagtgga 1080
atgtatccat ggagaacact ttatcagccg ggaaataatg cgggcaacgg tgtttaatta 1140
tatcgaatgt gattacaatc ggtggcggcg gcacagttgg tgtggcggcc tcagtccgga 1200
acaatttgaa aacaagaacc tcgcttaggc ctgtgtccat attacgtggg taggatca 1258
//
ID IS5 repeatmasker; DNA; ???; 1195 BP.
CC IS5 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 1195 BP; 329 A; 320 C; 316 G; 230 T; 0 other;
ggaaggtgcg aacaagtccc tgatatgaga tcatgtttgt catctggagc catagaacag 60
ggttcatcat gagtcatcaa cttaccttcg ccgacagtga attcagcagt aagcgccgtc 120
agaccagaaa agagattttc ttgtcccgca tggagcagat tctgccatgg caaaacatgg 180
tggaagtcat cgagccgttt taccccaagg ctggtaatgg ccggcgacct tatccgctgg 240
aaaccatgct acgcattcac tgcatgcagc attggtacaa cctgagcgat ggcgcgatgg 300
aagatgctct gtacgaaatc gcctccatgc gtctgtttgc ccggttatcc ctggatagcg 360
ccttgccgga ccgcaccacc atcatgaatt tccgccacct gctggagcag catcaactgg 420
cccgccaatt gttcaagacc atcaatcgct ggctggccga agcaggcgtc atgatgactc 480
aaggcacctt ggtcgatgcc accatcattg aggcacccag ctcgaccaag aacaaagagc 540
agcaacgcga tccggagatg catcagacca agaaaggcaa tcagtggcac tttggcatga 600
aggcccacat tggtgtcgat gccaagagtg gcctgaccca cagcctggtc accaccgcgg 660
ccaacgagca tgacctcaat cagctgggta atctgctgca tggagaggag caatttgtct 720
cagccgatgc cggctaccaa ggggcgccac agcgcgagga gctggccgag gtggatgtgg 780
actggctgat cgccgagcgc cccggcaagg taagaacctt gaaacagcat ccacgcaaga 840
acaaaacggc catcaacatc gaatacatga aagccagcat ccgggccagg gtggagcacc 900
catttcgcat catcaagcga cagttcggct tcgtgaaagc cagatacaag gggttgctga 960
aaaacgataa ccaactggcg atgttattca cgctggccaa cctgtttcgg gcggaccaaa 1020
tgatacgtca gtgggagaga tctcactaaa aactggggat aacgccttaa atggcgaaga 1080
aacggtctaa ataggctgat tcaaggcatt tacgggagaa aaaatcggct caaacatgaa 1140
gaaatgaaat gactgagtca gccgagaaga atttccccgc ttattcgcac cttcc 1195
//
ID IS10 repeatmasker; DNA; ???; 1329 BP.
CC IS10 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 1329 BP; 403 A; 316 C; 269 G; 341 T; 0 other;
ctgatgaatc ccctaatgat tttggtaaaa atcattaagt taaggtggat acacatcttg 60
tcatatgatc aaatggtttc gcgaaaaatc aataatcaga caacaagatg tgcgaactcg 120
atattttaca cgactctctt taccaattct gccccgaatt acacttaaaa cgactcaaca 180
gcttaacgtt ggcttgccac gcattacttg actgtaaaac tctcactctt accgaacttg 240
gccgtaacct gccaaccaaa gcgagaacaa aacataacat caaacgaatc gaccgattgt 300
taggtaatcg tcacctccac aaagagcgac tcgctgtata ccgttggcat gctagcttta 360
tctgttcggg caatacgatg cccattgtac ttgttgactg gtctgatatt cgtgagcaaa 420
aacgacttat ggtattgcga gcttcagtcg cactacacgg tcgttctgtt actctttatg 480
agaaagcgtt cccgctttca gagcaatgtt caaagaaagc tcatgaccaa tttctagccg 540
accttgcgag cattctaccg agtaacacca caccgctcat tgtcagtgat gctggcttta 600
aagtgccatg gtataaatcc gttgagaagc tgggttggta ctggttaagt cgagtaagag 660
gaaaagtaca atatgcagac ctaggagcgg aaaactggaa acctatcagc aacttacatg 720
atatgtcatc tagtcactca aagactttag gctataagag gctgactaaa agcaatccaa 780
tctcatgcca aattctattg tataaatctc gctctaaagg ccgaaaaaat cagcgctcga 840
cacggactca ttgtcaccac ccgtcaccta aaatctactc agcgtcggca aaggagccat 900
gggttctagc aactaactta cctgttgaaa ttcgaacacc caaacaactt gttaatatct 960
attcgaagcg aatgcagatt gaagaaacct tccgagactt gaaaagtcct gcctacggac 1020
taggcctacg ccatagccga acgagcagct cagagcgttt tgatatcatg ctgctaatcg 1080
ccctgatgct tcaactaaca tgttggcttg cgggcgttca tgctcagaaa caaggttggg 1140
acaagcactt ccaggctaac acagtcagaa atcgaaacgt actctcaaca gttcgcttag 1200
gcatggaagt tttgcggcat tctggctaca caataacaag ggaagactta ctcgtggctg 1260
caaccctact agctcaaaat ttattcacac atggttacgc tttggggaaa ttatgagggg 1320
atctctcag 1329
//
ID IS30 repeatmasker; DNA; ???; 1221 BP.
CC IS30 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 1221 BP; 393 A; 268 C; 287 G; 273 T; 0 other;
tgtagattca attggtcaac gcaacagtta tgtgaaaaca tggggttgcg gaggtttttt 60
gaatgagacg aacatttaca gcagaggaaa aagcctctgt ttttgaacta tggaagaacg 120
gaacaggctt cagtgaaata gcgaatatcc tgggttcaaa acccggaacg atcttcacta 180
tgttaaggga tactggcggc ataaaacccc atgagcgtaa gcgggctgta gctcacctga 240
cactgtctga gcgcgaggag atacgagctg gtttgtcagc caaaatgagc attcgtgcga 300
tagctactgc gctgaatcgc agtccttcga cgatctcacg tgaagttcag cgtaatcggg 360
gcagacgcta ttacaaagct gttgatgcta ataaccgagc caacagaatg gcgaaaaggc 420
caaaaccgtg cttactggat caaaatttac cattgcgaaa gcttgttctg gaaaagctgg 480
agatgaaatg gtctccagag caaatatcag gatggttaag gcgaacaaaa ccacgtcaaa 540
aaacgctgcg aatatcacct gagacaattt ataaaacgct gtactttcgt agccgtgaag 600
cgctacacca cctgaatata cagcatctgc gacggtcgca tagccttcgc catggcaggc 660
gtcatacccg caaaggcgaa agaggtacga ttaacatagt gaacggaaca ccaattcacg 720
aacgttcccg aaatatcgat aacagacgct ctctagggca ttgggagggc gatttagtct 780
caggtacaaa aaactctcat atagccacac ttgtagaccg aaaatcacgt tatacgatca 840
tccttagact caggggcaaa gattctgtct cagtaaatca ggctcttacc gacaaattcc 900
tgagtttacc gtcagaactc agaaaatcac tgacatggga cagaggaatg gaactggcca 960
gacatctaga atttactgtc agcaccggcg ttaaagttta cttctgcgat cctcagagtc 1020
cttggcagcg gggaacaaat gagaacacaa atgggctaat tcggcagtac tttcctaaaa 1080
agacatgtct tgcccaatat actcaacatg aactagatct ggttgctgct cagctaaaca 1140
acagaccgag aaagacactg aagttcaaaa caccgaaaga gataattgaa aggggtgttg 1200
cattgacaga ttgaatctac a 1221
//
ID IS150 repeatmasker; DNA; ???; 1443 BP.
CC IS150 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 1443 BP; 435 A; 294 C; 342 G; 372 T; 0 other;
tgtactgcac ccattttgtt ggacgatgaa atggaatagc ccctaatatg tcaaagccaa 60
aatacccttt tgaaaagcgc cttgaagtcg tgaatcacta cttcacaact gatgatggtt 120
acaggatcat ctcggcacgt tttggtgtcc cccgaaccca ggtcaggaca tgggttgccc 180
tctatgaaaa acatggagaa aaaggtttaa ttcccaaacc taaaggcgtt agtgctgatc 240
cagagttgcg tattaaggtc gtgaaagctg tgatcgagca gcacatgtcc cttaatcagg 300
ctgctgctca ctttatgctt gctggtagtg gttctgtagc caggtggctg aaggtctatg 360
aagagcgcgg agaagctggt ttacgcgcgc tcaagattgg caccaaaaga aacattgcaa 420
tatcagttga tccagaaaaa gcggcatcag cattggagct gtcaaaagac cgacgcattg 480
aggatcttga aaggcaagtt cgatttcttg aaacgcggct tatgtatcta aaaaagctga 540
aagccttagc tcatcccacg aaaaagtgaa agtactcaac gagctaaggc agttttatcc 600
tcttgatgag cttctcaggg ctgcggagat accgcgcagt acgttttatt atcatctaaa 660
ggctctcagc aagcctgaca agtatgcgga cgttaaaaag cgtattagtg agatttatca 720
cgagaataga ggccgatacg gataccgtag ggtaacgctg tctcttcatc gagaagggaa 780
acagattaac cataaagctg ttcagcgcct gatgggaacc ctctcactta aagcagcgat 840
taaggtcaag cgataccgct cttacagagg agaggtaggg caaaccgccc ctaatgttct 900
ccaaagagat ttcaaggcta cgcggccaaa cgagaagtgg gttaccgatg ttactgaatt 960
tgcagtcaat gggcgcaagc tgtatttgtc tccagtaata gatctcttca acaacgaagt 1020
tatttcttac agcctttcgg aaagaccagt gatgaacatg gttgagaata tgctcgatca 1080
ggcattcaaa aagcttaatc ctcacgagca tcctgttctg cactctgacc agggatggca 1140
gtatcgtatg agaagatatc aaaatatcct taaagaacat ggtattaaac aaagcatgtc 1200
agcaaaaggc aattgtctgg ataatgctgt ggtggagtgt ttctttggaa ccttaaagtc 1260
ggagtgtttt tatcttgatg agttcagtaa tataagcgaa ctgaaggatg ctgttacgga 1320
atatattgaa tactacaaca gcagaagaat tagcctgaaa ttaaaaggtc tgactccaat 1380
tgaatatcgg aatcagacct atatgcctcg tgtttaactg tccaactttt tggggtcagt 1440
aca 1443
//
ID IS186 repeatmasker; DNA; ???; 1338 BP.
CC IS186 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 1338 BP; 336 A; 323 C; 362 G; 317 T; 0 other;
cataagcgct aacttaaggg ttgtggtatt acgcctgata tgatttaacg tgccgatgaa 60
ttactctcac gataactggt cagcaattct ggcccatatt ggtaagcccg aagaactgga 120
tacttcggca cgtaatgccg gggctctaac ccgccgccgc gaaattcgtg atgctgcaac 180
tctgctacgt ctggggctgg cttacggccc cggggggatg tcattacgtg aagtcactgc 240
atgggctcag ctccatgacg ttgcaacatt atctgacgtg gctctcctga agcggctgcg 300
gaatgccgcc gactggtttg gcatacttgc cgcacaaaca cttgctgtac gcgccgcagt 360
tacgggttgt acaagcggaa agagattgcg tcttgtcgat ggaacagcaa tcagtgcgcc 420
cgggggcggc agcgctgaat ggcgactaca tatgggatat gatcctcata cctgtcagtt 480
cactgatttt gagctaaccg acagcagaga cgctgaacgg ctggaccgat ttgcgcaaac 540
ggcagacgag atacgcattg ctgaccgggg attcggttcg cgtcccgaat gtatccgctc 600
acttgctttt ggagaagctg attatatcgt ccgggttcac tggcgaggat tgcgctggtt 660
aactgcagaa ggaatgcgct ttgacatgat gggttttctg cgcgggctgg attgcggtaa 720
gaacggtgaa accactgtaa tgataggcaa ttcaggtaat aaaaaagccg gagctccctt 780
tccggcacgt ctcattgccg tatcacttcc tcccgaaaaa gcattaatca gtaaaacccg 840
actgctcagc gagaatcgtc gaaaaggacg agtagttcag gcggaaacgc tggaagcagc 900
gggccatgtg ctattgctaa catcattacc ggaagatgaa tattcagcag agcaagtggc 960
tgattgttac cgtctgcgat ggcaaattga actggctttt aagcggctca aaagtttgct 1020
gcacctggat gctttgcgtg caaaggaacc tgaactcgcg aaagcgtgga tatttgctaa 1080
tctactcgcc gcatttttaa ttgacgacat aatcagccat cgctggattt cccccccaga 1140
agtgccggat ccgaaaagaa gaactaactc gttgtggaga ataacaaaaa tggtcatctg 1200
gagcttacag gtggccattc gtgggacagt atccctgaca gcctacaaaa cgcaattgaa 1260
gaacgcgagg catcgtctta acgaggcacc gaggcgtcgc attcttcaga tggttcaacc 1320
cttaagttag cgcttatg 1338
//
ID Tn1000 repeatmasker; DNA; ???; 5981 BP.
CC Tn1000 DNA
XX
KW ARTEFACT/.
XX
CC consensus - See RepBase for additional annotations.
XX
CC RepeatMasker Annotations:
CC Type: ARTEFACT
CC SubType:
CC Species: root
CC SearchStages: 10
CC BufferStages:
XX
SQ Sequence 5981 BP; 1618 A; 1277 C; 1265 G; 1821 T; 0 other;
ggggtttgag ggccaatgga acgaaaacgt acgtttatgg tataacttat tgattataat 60
acagtataca aaggtccctt ttcagggacc ctttcgtatg ttgtagctga ttttattttc 120
ttcttttctt ttgggtgctt ttaatagcca tatatgatgt ttcatataaa gttaaaagtt 180
tccccatctg tctatctata gcgtcatgtt tttcaggatt tcttaatttc tgcagcagtt 240
tagatatata tttcgcaggt aactttatta ttaatgaatt atgggattga tacatttcct 300
ttgtccaatc taaatctttt cctgatttca atacctcact ctcatctcta ttaattataa 360
aaccgagctt tccatacgga cctgttaaat atgattgtaa ttgtctatac tcagatggac 420
ctaattcttc aaaattttta gcatcaaaaa caacttgtct tgttttatag tcctccaata 480
ctcgtttcca aaaatcagat ttgccaccat tggtgcctat aatatctcgt ctctgaactg 540
cgttaccatt tggatgggac ttgatgtctg ttaggtggga tgcaaatact attcttagtg 600
cgtctaaaca ccattgttca aattcagtgg caccttcatt tcctatcggt atctgatcta 660
gatgagtagt tatttgacct attgttttat ttctaatggc tgaattatct gaaataatat 720
taatatcata ttcgtcattt atctcctctg cttcctctgg agcaagtgca ttacgattta 780
gattcaaacc aagccagtaa catggatgaa ttaataattt ctcattactt tcaaaacctt 840
tatctggagt tcgcccgtca tggcaaaatg aataggatga ggtgttttta tcacgaatac 900
caacaaatcc tacactatac aaactttgga gaattccact tgcctttaac aactgtattt 960
cagacgttat tttaggatct ccattttctt cgattaattc gaaagatgct tctatttttt 1020
ttaagcacgt ataaactgtt aattcaggtt caatgctacg aaatgcacta gttataacct 1080
gtattgaagg aaagatcttc tgatactctt tccagagatc ttcaagtctg gccatggaaa 1140
ttgacttggc tgcatattct aggtcagtgt ttatgatagt ttctctattc tctctgaatg 1200
cggaaaaaaa agcttcattc aacaatgata gtaaatccct gggccggtaa agggtaaatt 1260
gcaaacatcg cttaaaacca ttcctccctt taagatcatc cgctgtgcat ctatcccaaa 1320
ctcgttgatc tttctcaata tctagcttaa atgctacttt cattctttta gctgacagca 1380
ttaggagttg tgcccagtcc caatgcaacc ttatgacttg accctctata tttctcgagt 1440
aatcaggatc ttcctttgat agcgacctaa atatattatc ccttaaaaaa attattggac 1500
gaatgcattt tgctttttga tttaattcaa tagatgcata tgctagacct gcaatgattc 1560
caattcctat attatccggt tcatacgcct catctagctt atccattaat atgacaactt 1620
tcctgtctga gcgttcaaga agtgatacta tattattttc tatttctgag atattcaaat 1680
tgaattgaag atcaccaatt gattcttctg ggttattttc atctaaatac tcctttgcga 1740
caagcctaca ctttcttaaa atgtcacctt gtgcagaatt ccattttttc aaatgttcat 1800
tcaacaatgt ttctgatgat atttgagatg acaatttgta atgagatgat atatatgatg 1860
ctatctccat tagcatagcg tatcgccata atagtcttgt tgctgccctt gctaaattaa 1920
atgatcctgt aaatggtttc aacattgatc tgaaaccaat aatttgagaa tcgtctggtg 1980
agaaactcag gattaatatt tttttgtctt tcttccaatg ctcatttagc tgaataaata 2040
aagcactttt acctgtccct cgtctaccaa caacaatggt cctgtcatca gtttcaatta 2100
gagtcctaaa gtcagcagtt tcaatgaaag cattactcaa catcttttta tcattttctg 2160
ctgtcgtatc accaaacgga ttagactttg aagtaatatt caattccata ttcaaccttt 2220
tatgttagtt gctttcattt attactttat atactgttga acgagcaata ttcattgttt 2280
ttgatatatg tgaggcacct aacccctgtt gccacatatt taatactgca tctctatcta 2340
tttttctttt tctaccaaaa acaactcctt ttgccattgc ctcttggcga ccttcattgg 2400
tacgctctag tattctctgt cgttctgcct gggccactgc agatagaata gtgacaacca 2460
ttttacccat ctccccatcg gtactgattc cgtcatcaat aaaccgaatg gatacacctt 2520
gggcgtcaaa ctcttttatt aactggatca tgtcagcagt atcgcgccca aggcggtcaa 2580
gtttcttcac caagatgacg tcaccttcct ccaccttcat cctcagcaag tccagccctt 2640
tccgatcgct tgaactgccc gatgccttgt cagtaaagat gcgatttgct ttcacgcctg 2700
cgtctttgag tgcccgaacc tgaatatcga gagattgctg gctggttgat acccgtgcgt 2760
aaccaaaaag tcgcataaaa atgtatccta aatcaaatat cggacaagca gtgtctgtta 2820
taacaaaaaa tcgatttaat agacacatta acagcactgt ttttatgtgt gcgataattt 2880
ataatatttc ggacggttgc aaaattgtta atgaataact gtcaggtagg gagcctgata 2940
tgcctgtcga ctttctaacc tctgaccaaa aacagaatta cggttgttat gctgcagaac 3000
ctaatgacgt gcaactggcg cgctattttc atcttgatga acgggatctg gccttcatta 3060
accaacgacg gggcaaacat aataggctgg gcattgcgct tcagctcacc acagcccgtt 3120
ttctgggaac atttctgacg gatttaactc aggttctgcc tggtgttcaa cattttgtcg 3180
cggtacagct taatatccac cgtccagaag ttctctcccg ctatgctgaa cgggacacta 3240
cccttagaga acatactgca ttaattaagg aatattacgg ctatcatgaa tttggtgatt 3300
ttccatggtc tttccgcctg aagcgtctgc tatatacccg ggcgtggctc agtaatgagc 3360
gaccgggtct gatgtttgat tttgccactg catggttgct tcaaaataag gtattactgc 3420
ccggagcaac cacactagta cgtctcatca gtgaaattcg tgaaagggca aatcagcggc 3480
tgtggaaaaa gctggccgca ctgccgaaca aatggcaggc agctcaagtg atggagcttc 3540
tggtcattcc ggaaggtcag cgtgtatcag cactggaaca gttgaaaaaa ggccctgtta 3600
cagtcagtgg acctgcgttt aatgaagcgc tggaacgata tatccgatta cgaagtcttg 3660
agttttcccg actgaacttt tccggtctgc ctgccattca actgcgtaat ctggctcgtt 3720
atgctggcat ggcgtcggta aaatatatcg ctcgaatgcc acagcagaga aagcttgctg 3780
tacttactgc attcgttaaa gcacaggaaa taacggcatt agacgatgcc gttgatgtgc 3840
ttgatatgct aattctggac attatccgcg aagcaaagaa aaccgggcaa aaaaaaagac 3900
tcaggacact gaaagatctt gatcaggccg cattgttact ggcgcgggca tgtgcattgt 3960
tgctggatga taatacagat gtcccagatc tcaggcaggt tatcttcaag tgcgtaccca 4020
aaaacagact ggcagaatct gtaagcaagg ttaatgaact tgctcgtcca cagaacaata 4080
atttccatga cgaaatggtt gagcagtacg gtcgggttaa acgttttctt ccggcggtgt 4140
tgcgggacct gcatttccgt gcggcaccgg caggtgaaca tgtactggct gcgattcatt 4200
atctggcaga actgaatggt tcgaaaaagc gcatccttga tgatgcgcct gaacatatta 4260
tcaccggtcc ctggaaacgc ctcgtatacg atgcggaggg acggatacag cgtgcaggtt 4320
attcactatg tttgctggaa cgccttcagg atgcactgcg ccgccgggac atctggcttg 4380
aaaacagtga tcgctgggga gatcctcgcg agaagttgtt gcaaggtgaa gagtggcaga 4440
ctcagcgtat tcctgtctgt cgggcactgg gacatcctgt cgatggacgt aaaggtgtgc 4500
aacaactggc tattcagctg gatgagacct ggaaagccgt ggcatcacga tttgaaaaga 4560
atgcggaagt tcatatctgt aatgaaggta aatatccatc cctgactatc agttgtctgg 4620
agaaacagga agagccacca tcattgcttc gtctaaataa tcggatcaaa cagctactcc 4680
caccggtaga tttaacggaa ctgttacttg agatagatgc ccagacagga tttacacatg 4740
agtttgcgca tgtcagtgaa tctggtgctc gagcgcaaga tttgcacatc agtttatgtg 4800
cggtattgat ggctgaagcc tgtaatatcg gactggaacc gctgataaag cacaatatac 4860
cagcactgac ccgccatcgg ctcagttggg tgaaacagaa ttaccttcgt gcagaaacgc 4920
tggtcagcgc caatgcccgc ctggttgatt ttcagtccac actggagctt gctggtcgtt 4980
ggggaggtgg agaagtggca tcagctgacg gcatgcgctt tgtcacacca gtgaagacca 5040
tcaactcagg atctaacaga aaatattttg gttctggacg aggcatcacc tggtataact 5100
tcgtatctga tcagtactct gggttccatg gcattgtggt acccggtaca ttacgggatt 5160
cgatttttgt actggaagga cttcttgagc agcagacagg gctgaatcca gttgaaatca 5220
tgacagacac tgcgggtagc agcgatatta ttttcggtct gttctggcta ctggggtatc 5280
agttttcccc ccggcttgcc gatgcaggtg aggcggtgtt ctggcgggtg aataaatcgg 5340
caaactacgg agtactggat aagttggccc gaggatatgc agatctgtca aaagcggaga 5400
gtcagtggga tgagatgatg cgaaccgctg gttcgctgaa gttgggtaca attcatgcgt 5460
cagaactcat tcgctcttta ctgaaaagct cgcgcccatc aggactggca caggcaatta 5520
tggaagtagg gcgtgtaaac aaaacgctat atctcctcaa ttatattgat gatgaagatt 5580
atcgtcggcg gatcctgacg cagcttaatc gaggagaagg ccgccacgct gtggctcgtg 5640
cgatttgtta cggacaacgc ggagagatca gaaagcgtta tcgtgaaggg caggaagatc 5700
aactgggggc gctgggcctg gttactaatg cagtggttct gtggaacacg ctctatatgg 5760
aggaagcgtt gagctggatg cgccgtaatg gcgaagaaat tatagatgaa gatatcgctc 5820
ggctatctcc cctgatgcac gggcatatca atatgttggg ccattataca ttcacgttgc 5880
cagaggatat tttaaaaggg gaactgagag ctctaaattt aaatataaac aacgaattat 5940
ctccttaacg tacgttttcg ttccattggc cctcaaaccc c 5981
//
ID AluJb_short_; SV 0; linear; DNA; STD; ???; 302 BP.
XX
DE RepbaseID: AluJbXX
KW SINE/Alu.
XX
CC AluJb_short_ DNA
XX
CC RepeatMasker Annotations:
CC Type: SINE
CC SubType: Alu
CC Species: Primates
CC SearchStages: 40,50
CC BufferStages:
CC Refineable
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 302 BP; 78 A; 82 C; 98 G; 44 T; 0 other;
ggccgggcgc ggtggctcac gcctgtaatc ccagcacttt gggaggccga ggcgggagga 60
tcacttgagc ccaggagttc gagaccagcc tgggcaacat ggtgaaaccc cgtctctaca 120
aaaaatacaa aaattagccg ggcgtggtgg cgcgcgcctg tagtcccagc tactcgggag 180
gctgaggcag gaggatcgct tgagcccggg aggtcgaggc tgcagtgagc cgtgatcgcg 240
ccactgcact ccagcctggg cgacagagcg agaccctgtc tcaaaaaaaa aaaaaaaaaa 300
aa 302
//
ID AluSx_short_; SV 0; linear; DNA; STD; ???; 302 BP.
XX
DE RepbaseID: AluSxXX
KW SINE/Alu.
XX
CC AluSx_short_ DNA
XX
CC RepeatMasker Annotations:
CC Type: SINE
CC SubType: Alu
CC Species: Primates
CC SearchStages: 20,40,50
CC BufferStages:
CC Refineable
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 302 BP; 80 A; 82 C; 96 G; 44 T; 0 other;
ggccgggcgc ggtggctcac gcctgtaatc ccagcacttt gggaggccga ggcgggcgga 60
tcacctgagg tcaggagttc gagaccagcc tggccaacat ggtgaaaccc cgtctctact 120
aaaaatacaa aaattagccg ggcgtggtgg cgcgcgcctg taatcccagc tactcgggag 180
gctgaggcag gagaatcgct tgaacccggg aggcggaggt tgcagtgagc cgagatcgcg 240
ccactgcact ccagcctggg cgacagagcg agactccgtc tcaaaaaaaa aaaaaaaaaa 300
aa 302
//
ID AluY_short_; SV 0; linear; DNA; STD; ???; 301 BP.
XX
DE RepbaseID: AluYXX
KW SINE/Alu.
XX
CC AluY_short_ DNA
XX
CC RepeatMasker Annotations:
CC Type: SINE
CC SubType: Alu
CC Species: Primates
CC SearchStages: 20,40,50
CC BufferStages:
CC Refineable
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 301 BP; 81 A; 80 C; 98 G; 42 T; 0 other;
ggccgggcgc ggtggctcac gcctgtaatc ccagcacttt gggaggccga ggcgggcgga 60
tcacgaggtc aggagatcga gaccatcctg gctaacacgg tgaaaccccg tctctactaa 120
aaatacaaaa aattagccgg gcgtggtggc gggcgcctgt agtcccagct actcgggagg 180
ctgaggcagg agaatggcgt gaacccggga ggcggagctt gcagtgagcc gagatcgcgc 240
cactgcactc cagcctgggc gacagagcga gactccgtct caaaaaaaaa aaaaaaaaaa 300
a 301
//
ID FLAM_C_short_; SV 0; linear; DNA; STD; ???; 133 BP.
XX
KW SINE/Alu.
XX
CC FLAM_C_short_ DNA
XX
CC RepeatMasker Annotations:
CC Type: SINE
CC SubType: Alu
CC Species: Primates
CC SearchStages: 40,50
CC BufferStages:
CC Refineable
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 133 BP; 37 A; 36 C; 42 G; 18 T; 0 other;
ggccgggcgc ggtggctcac gcctgtaatc ccagcacttt gggaggccga ggcgggagga 60
tcgcttgagc ccaggagttc gagaccagcc tgggcaacat agcgagaccc cgtctctaaa 120
aaaaaaaaaa aaa 133
//
ID FRAM_short_; SV 0; linear; DNA; STD; ???; 166 BP.
XX
DE RepbaseID: FRAMXX
KW SINE/Alu.
XX
CC FRAM_short_ DNA
XX
CC RepeatMasker Annotations:
CC Type: SINE
CC SubType: Alu
CC Species: Primates
CC SearchStages: 40,50
CC BufferStages:
CC Refineable
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 166 BP; 43 A; 46 C; 55 G; 22 T; 0 other;
gccgggcgcg gtggcgcgcg cctgtagtcc cagctactcg ggaggctgag gcgggaggat 60
cgcttgagcc caggagttcg aggctgcagt gagctatgat cgcgccactg cactccagcc 120
tgggcgacag agcgagaccc cgtctcaaaa aaaaaaaaaa aaaaaa 166
//
ID D20S16_; SV 0; linear; DNA; STD; ???; 98 BP.
XX
DE RepbaseID: D20S16XX
KW Satellite/.
XX
CC D20S16_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType:
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 98 BP; 23 A; 36 C; 17 G; 22 T; 0 other;
acaagacctc tcctccctgg gtcgccagct tcctgaccct cgaactgcaa caacgttgct 60
cctgcctggg tcttcagctc cacaaaaatc aatctaga 98
//
ID HSAT5_; SV 0; linear; DNA; STD; ???; 86 BP.
XX
KW Satellite/.
XX
CC HSAT5_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType:
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 86 BP; 22 A; 30 C; 18 G; 16 T; 0 other;
cactgacaag gcctcactga ccaggtcctt actgacaagg cctcactgac aaggcctcac 60
tgaccaggtc cttactgaca aggcct 86
//
ID SUBTEL_sat; SV 0; linear; DNA; STD; ???; 174 BP.
XX
DE RepbaseID: SUBTEL_satXX
KW Satellite/.
XX
CC SUBTEL_sat DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType:
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
CC Description: general
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 174 BP; 0 A; 84 C; 54 G; 24 T; 12 other;
gcgcctctct gcgcctgcgc cggcgcsscg cgcctctctg cgcctgcgcc ggcgcsscgc 60
gcctctctgc gcctgcgccg gcgcsscgcg cctctctgcg cctgcgccgg cgcsscgcgc 120
ctctctgcgc ctgcgccggc gcsscgcgcc tctctgcgcc tgcgccggcg cssc 174
//
ID ACRO1_; SV 0; linear; DNA; STD; ???; 147 BP.
XX
DE RepbaseID: XX
KW Satellite/acromeric.
XX
CC ACRO1_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: acromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 147 BP; 32 A; 59 C; 23 G; 33 T; 0 other;
cagttccagg cacccaggaa tcaccaccaa actcaccaat ttcactgagt tactccccag 60
tctctctcat gtcttcaccc ccagccctca gggactctcc tgtctgtccc agctactctc 120
caaccacgcc cagatttcag cgggagt 147
//
ID ALR_; SV 0; linear; DNA; STD; ???; 171 BP.
XX
DE RepbaseID: ALR_XX
KW Satellite/centromeric.
XX
CC ALR_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: centromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 171 BP; 49 A; 29 C; 33 G; 55 T; 5 other;
ttgtagaatc tgcaagtgga tatttggasc kctttgaggm cttcgktgga aacgggaata 60
tcttcacata aaaactagac agaagcattc tcagaaactt ctttgtgatg tttgcattca 120
actcacagag ttgaacmttc cttttgatag agcagttttg aaacactctt t 171
//
ID ALRa_; SV 0; linear; DNA; STD; ???; 172 BP.
XX
DE RepbaseID: ALRa_XX
KW Satellite/centromeric.
XX
CC ALRa_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: centromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 172 BP; 53 A; 29 C; 39 G; 51 T; 0 other;
ttgtagaatc tgcgaaggga catttgggag ctcattgagg cctatggtga aaaagcgaat 60
atccccagat aaaaactaga aagaagctat ctgagaaact gctttgtgat gtgtgcattc 120
atctcacaga gttaaacctt tcttttgatt cagcagtttg gaaacactgt tt 172
//
ID ALRb_; SV 0; linear; DNA; STD; ???; 171 BP.
XX
DE RepbaseID: ALRbXX
KW Satellite/centromeric.
XX
CC ALRb_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: centromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 171 BP; 54 A; 27 C; 33 G; 54 T; 3 other;
ttgtggaatt tgcaagtgga gatttcaagc gctttgaggc caawnktaga aaaggaaata 60
tcttcgtata aaaactagac agaataattc tcagtaactt ctttgtgttg tgtgtattca 120
actcacagag ttgaaccttc ctttagacag agcagatttg aaacactctt t 171
//
ID GSATII_; SV 0; linear; DNA; STD; ???; 216 BP.
XX
DE RepbaseID: XX
KW Satellite/centromeric.
XX
CC GSATII_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: centromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 216 BP; 44 A; 64 C; 83 G; 25 T; 0 other;
ggtaccccaa ggcgggcaga aggcccatga ggggaaggtg aggtttgagg gaggggaggt 60
gaggcacctg tggcagaaaa aaaaaaaacc gcgccgcgga gaagcggggc ctgggtcccc 120
cacggacgaa agtgccttcc catcagcccc tgcgctgggc cccggggacc ctggcgtccc 180
tggttcgaac ccagggtgcg cctcgggccc gctagg 216
//
ID GSATX_; SV 0; linear; DNA; STD; ???; 218 BP.
XX
DE RepbaseID: XX
KW Satellite/centromeric.
XX
CC GSATX_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: centromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 218 BP; 37 A; 69 C; 91 G; 21 T; 0 other;
ggcaccccaa agcggcaaga agtcccccgg gggacgggga caggacgcca ggcttgcagg 60
gggacgttga ggcagcccgg ggaaaaaagc ggcgaggccg aagaggaggc cggggtcctc 120
ccacggagga cagtgccttc ccggcagccc ctgcgccggg cccggggggg tcgtggagtc 180
cctggcttgc acccagggtg cgtgtctcgc ccacgggg 218
//
ID GSAT_; SV 0; linear; DNA; STD; ???; 217 BP.
XX
DE RepbaseID: XX
KW Satellite/centromeric.
XX
CC GSAT_ DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: centromeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 217 BP; 41 A; 64 C; 88 G; 24 T; 0 other;
aaggccccca caagcgaaaa cggggccgca gggtggcgtg ggcgggccgc agggactcag 60
ggggacgttg aggcaggcag aggggagaag cggcgagacc gcagggaatg ctgggagcct 120
cccaaggagg cctctcccat cccagaagcc cccagggctg tcccgggcgg gctgtaaagc 180
cccaggcttt ggagcagggt gcctgtgtct ctcgcgg 217
//
ID SUBTEL2_sat; SV 0; linear; DNA; STD; ???; 87 BP.
XX
DE RepbaseID: SUBTEL2_satXX
KW Satellite/subtelomeric.
XX
CC SUBTEL2_sat DNA
XX
CC RepeatMasker Annotations:
CC Type: Satellite
CC SubType: subtelomeric
CC Species: Primates
CC SearchStages: 50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 87 BP; 0 A; 42 C; 27 G; 12 T; 6 other;
gcgcctctct gcgcctgcgc cggcgcsscg cgcctctctg cgcctgcgcc ggcgcsscgc 60
gcctctctgc gcctgcgccg gcgcssc 87
//
ID U13_; SV 0; linear; DNA; STD; ???; 108 BP.
XX
KW snRNA/.
XX
CC U13_ DNA
XX
CC RepeatMasker Annotations:
CC Type: snRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 108 BP; 21 A; 26 C; 26 G; 35 T; 0 other;
gatccttttg tagttcataa gcgtgatgat tgggttttca cgctcatgtg tgagatgtgc 60
ctccctcaaa ccttgttacg acgtcggcac attacccgtc tgacgtga 108
//
ID tRNA-Arg-CGA_; SV 0; linear; DNA; STD; ???; 76 BP.
XX
DE RepbaseID: XX
KW tRNA/.
XX
CC tRNA-Arg-CGA_ DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 76 BP; 14 A; 20 C; 26 G; 16 T; 0 other;
ggccgcgtgg cctaatggat aaggcgtctg acttcggatc agaagattgc aggttcgagt 60
cctgccgcgg tcgcca 76
//
ID tRNA-Arg-CGG; SV 0; linear; DNA; STD; ???; 76 BP.
XX
DE RepbaseID: tRNA-Arg-CGGXX
KW tRNA/.
XX
CC tRNA-Arg-CGG DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 76 BP; 14 A; 18 C; 26 G; 18 T; 0 other;
ggccgcgtgg cctaatggat aaggcgtctg attccggatc agaagattga gggttcgagt 60
cccttcgtgg tcgcca 76
//
ID tRNA-Asn-AAT; SV 0; linear; DNA; STD; ???; 77 BP.
XX
DE RepbaseID: XX
KW tRNA/.
XX
CC tRNA-Asn-AAT DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 77 BP; 18 A; 21 C; 23 G; 15 T; 0 other;
gtctctgtgg cgcaatcggt cagagcgttc ggctattaac cgaacggtga gtagttcaag 60
accacccagg gacgcca 77
//
ID tRNA-His-CAY_; SV 0; linear; DNA; STD; ???; 75 BP.
XX
DE RepbaseID: tRNA-His-CAY_XX
KW tRNA/.
XX
CC tRNA-His-CAY_ DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 75 BP; 15 A; 22 C; 21 G; 17 T; 0 other;
gccatgatcg tatagtggtt agtactctgc gctgtggccg cagcaacctc ggttcgaatc 60
cgagtcacgg cacca 75
//
ID tRNA-Leu-CTA_; SV 0; linear; DNA; STD; ???; 85 BP.
XX
DE RepbaseID: tRNA-Leu-CTA_XX
KW tRNA/.
XX
CC tRNA-Leu-CTA_ DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 85 BP; 13 A; 24 C; 29 G; 19 T; 0 other;
ggtagtgtgg ccgagcggtc taaggcgctg gatttaggct ccagtctctt cgggggcgtg 60
ggttcgaatc ccaccactgc cacca 85
//
ID tRNA-Leu-TTA(m); SV 0; linear; DNA; STD; ???; 78 BP.
XX
DE RepbaseID: tRNA-Leu-TTA(m)XX
KW tRNA/.
XX
CC tRNA-Leu-TTA(m) DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
CC Description: (mitochondrial)
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 78 BP; 26 A; 17 C; 13 G; 22 T; 0 other;
gttaagatgg cagagcctgg taatcgcata aaacttaaaa ttttacagtc agaggttcaa 60
ctcctcttct taacacca 78
//
ID tRNA-SeC(e)-TGA; SV 0; linear; DNA; STD; ???; 89 BP.
XX
DE RepbaseID: tRNA-SeC(e)-TGAXX
KW tRNA/.
XX
CC tRNA-SeC(e)-TGA DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 89 BP; 16 A; 25 C; 26 G; 22 T; 0 other;
gcccggatga tcctcagtgg tctggggtgc aggcttcaaa cctgtagctg tctagcgaca 60
gagtggttca attccacctt tcgggccca 89
//
ID tRNA-Ser-TCA; SV 0; linear; DNA; STD; ???; 85 BP.
XX
DE RepbaseID: tRNA-Ser-TCAXX
KW tRNA/.
XX
CC tRNA-Ser-TCA DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 85 BP; 15 A; 25 C; 28 G; 17 T; 0 other;
gcagcgatgg ccgagtggtt aaggcgttgg acttgaaatc caatggggtc tccccgcgca 60
ggttcgaacc ctgctcgctg cgcca 85
//
ID tRNA-Ser-TCA(m); SV 0; linear; DNA; STD; ???; 73 BP.
XX
DE RepbaseID: tRNA-Ser-TCA(m)XX
KW tRNA/.
XX
CC tRNA-Ser-TCA(m) DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
CC Description: (mitochondrial)
XX
CC Source: RepBase RepeatMasker Edition
XX
SQ Sequence 73 BP; 15 A; 15 C; 22 G; 21 T; 0 other;
gagaaggtca cagaggttat gggattggct tgaaaccagt ctgtgggggg ttcgattccc 60
tcctttttca cca 73
//
ID tRNA-Ser-TCA_; SV 0; linear; DNA; STD; ???; 85 BP.
XX
DE RepbaseID: tRNA-Ser-TCA_XX
KW tRNA/.
XX
CC tRNA-Ser-TCA_ DNA
XX
CC RepeatMasker Annotations:
CC Type: tRNA
CC SubType:
CC Species: Vertebrata_vertebrates
CC SearchStages: 35,40,50
CC BufferStages:
XX
CC Source: RepBase RepeatMasker Edition