Latest conda-forge release 0.2.7 instead of 0.2.8?

[dominiquesydow]

Describe the bug

Hi!

Thank you for cutting a new release v0.2.8 on GH!
https://github.com/rasbt/biopandas/releases/tag/v0.2.8

As far as I understand, you also cut a new release on conda-forge, right?
conda-forge/biopandas-feedstock#12

However, when installing biopandas via conda-forge I only retrieve version 0.2.7.
Could you please check if you run into the same issue?

Steps/Code to Reproduce

conda create -n biopandas biopandas
conda activate biopandas
conda list biopandas

Expected Results

biopandas 0.2.8 installation.

Actual Results

biopandas 0.2.7 installation.

# Name                    Version                   Build  Channel
biopandas                 0.2.7              pyh9f0ad1d_1    conda-forge

If I ask for 0.2.8 directly

conda install biopandas=0.2.8

I get

PackagesNotFoundError: The following packages are not available from current channels:

  - biopandas=0.2.8

Current channels:

  - https://conda.anaconda.org/conda-forge/linux-64
  - https://conda.anaconda.org/conda-forge/noarch
  - https://repo.anaconda.com/pkgs/main/linux-64
  - https://repo.anaconda.com/pkgs/main/noarch
  - https://repo.anaconda.com/pkgs/r/linux-64
  - https://repo.anaconda.com/pkgs/r/noarch

To search for alternate channels that may provide the conda package you're
looking for, navigate to

    https://anaconda.org

and use the search bar at the top of the page.

Versions

>>> import biopandas; print("biopandas", biopandas.__version__)
biopandas 0.2.7
>>> import platform; print(platform.platform())
Linux-4.15.0-154-generic-x86_64-with-glibc2.10
>>> import sys; print("Python", sys.version)
Python 3.8.10 | packaged by conda-forge | (default, May 11 2021, 07:01:05) 
[GCC 9.3.0]

# conda install scikit-learn numpy scipy -y
>>> import sklearn; print("Scikit-learn", sklearn.__version__)
Scikit-learn 0.24.2
>>> import numpy; print("NumPy", numpy.__version__)
NumPy 1.21.2
>>> import scipy; print("SciPy", scipy.__version__)
SciPy 1.7.1

[rasbt]

Hi there! Thanks for opening this issue. Trying to install it from conda-forge, I am getting exactly the same issue. My initial guess is that's because Python 3.8 & 3.9 are not explicitly specified in the setup.py file. I am guessing that you are probably also using one of these two more recent versions of Python.

I will make a new Biopandas release with the updated setup.py and see if that solves the issue.

[rasbt]

Alright, the problem should be fixed now. When you run conda install biopandas -c conda-forge it should install version 0.2.9 now.

[dominiquesydow]

@rasbt, wonderful, thank you very much!