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Below is the code, along with the message returned. The package "cli" is installed and loaded. I am using R version 4.0.3.
devtools::install_github("BillPetti/baseballr")
Downloading GitHub repo BillPetti/baseballr@HEAD
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
1: All
2: CRAN packages only
3: None
4: cli (3.0.0 -> 3.0.1) [CRAN]
Enter one or more numbers, or an empty line to skip updates: 1
cli (3.0.0 -> 3.0.1) [CRAN]
Installing 1 packages: cli
There is a binary version available but the source version is later:
binary source needs_compilation
cli 3.0.0 3.0.1 TRUE
Do you want to install from sources the package which needs compilation? (Yes/no/cancel) Yes
installing the source package ‘cli’
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
dyld: lazy symbol binding failed: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
The downloaded source packages are in
‘/private/var/folders/gh/2bzyrwxj66vc6z6287wvl_cr0000gn/T/RtmpAXqS9W/downloaded_packages’
✓ checking for file ‘/private/var/folders/gh/2bzyrwxj66vc6z6287wvl_cr0000gn/T/RtmpAXqS9W/remotesb4bd10e5bee8/BillPetti-baseballr-f4c9420/DESCRIPTION’ (610ms)
─ preparing ‘baseballr’: (553ms)
✓ checking DESCRIPTION meta-information ...
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
─ checking for LF line-endings in source and make files and shell scripts (645ms)
─ checking for empty or unneeded directories
─ building ‘baseballr_0.8.5.tar.gz’
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
dyld: lazy symbol binding failed: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
/Library/Frameworks/R.framework/Resources/bin/INSTALL: line 34: 46556 Done echo 'tools:::.install_packages()'
46557 Abort trap: 6 | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R" $myArgs --no-echo --args ${args}
Warning messages:
1: In i.p(...) : installation of package ‘cli’ had non-zero exit status
2: In i.p(...) :
installation of package ‘/var/folders/gh/2bzyrwxj66vc6z6287wvl_cr0000gn/T//RtmpAXqS9W/fileb4bd5b587a02/baseballr_0.8.5.tar.gz’ had non-zero exit status
The text was updated successfully, but these errors were encountered:
What happens if you don't update cli? I don't know anything about this error, but appears unrelated to baseballr and potentially a more general problem with R, Mac, and Xcode:
Below is the code, along with the message returned. The package "cli" is installed and loaded. I am using R version 4.0.3.
devtools::install_github("BillPetti/baseballr")
Downloading GitHub repo BillPetti/baseballr@HEAD
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
1: All
2: CRAN packages only
3: None
4: cli (3.0.0 -> 3.0.1) [CRAN]
Enter one or more numbers, or an empty line to skip updates: 1
cli (3.0.0 -> 3.0.1) [CRAN]
Installing 1 packages: cli
There is a binary version available but the source version is later:
binary source needs_compilation
cli 3.0.0 3.0.1 TRUE
Do you want to install from sources the package which needs compilation? (Yes/no/cancel) Yes
installing the source package ‘cli’
trying URL 'https://cran.rstudio.com/src/contrib/cli_3.0.1.tar.gz'
Content type 'application/x-gzip' length 225589 bytes (220 KB)
downloaded 220 KB
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
dyld: lazy symbol binding failed: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
/Library/Frameworks/R.framework/Resources/bin/INSTALL: line 34: 46518 Done echo 'tools:::.install_packages()'$myArgs --no-echo --args $ {args}
46519 Abort trap: 6 | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R"
The downloaded source packages are in
‘/private/var/folders/gh/2bzyrwxj66vc6z6287wvl_cr0000gn/T/RtmpAXqS9W/downloaded_packages’
✓ checking for file ‘/private/var/folders/gh/2bzyrwxj66vc6z6287wvl_cr0000gn/T/RtmpAXqS9W/remotesb4bd10e5bee8/BillPetti-baseballr-f4c9420/DESCRIPTION’ (610ms)
─ preparing ‘baseballr’: (553ms)
✓ checking DESCRIPTION meta-information ...
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
─ checking for LF line-endings in source and make files and shell scripts (645ms)
─ checking for empty or unneeded directories
─ building ‘baseballr_0.8.5.tar.gz’
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
dyld: lazy symbol binding failed: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: _utimensat
Referenced from: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libR.dylib (which was built for Mac OS X 10.13)
Expected in: /usr/lib/libSystem.B.dylib
/Library/Frameworks/R.framework/Resources/bin/INSTALL: line 34: 46556 Done echo 'tools:::.install_packages()'$myArgs --no-echo --args $ {args}
46557 Abort trap: 6 | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R"
Warning messages:
1: In i.p(...) : installation of package ‘cli’ had non-zero exit status
2: In i.p(...) :
installation of package ‘/var/folders/gh/2bzyrwxj66vc6z6287wvl_cr0000gn/T//RtmpAXqS9W/fileb4bd5b587a02/baseballr_0.8.5.tar.gz’ had non-zero exit status
The text was updated successfully, but these errors were encountered: