From 949fff066db33955be8d90c11f9c716fb1937f61 Mon Sep 17 00:00:00 2001
From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com>
Date: Fri, 21 Jan 2022 19:57:11 +0000
Subject: [PATCH] Upgrade: Bump ipython from 7.16.1 to 7.16.3

Bumps [ipython](https://github.com/ipython/ipython) from 7.16.1 to 7.16.3.
- [Release notes](https://github.com/ipython/ipython/releases)
- [Commits](https://github.com/ipython/ipython/compare/7.16.1...7.16.3)

---
updated-dependencies:
- dependency-name: ipython
  dependency-type: direct:development
...

Signed-off-by: dependabot[bot] <support@github.com>
---
 Pipfile.lock     | 1855 +++++++++++++++++++++++++++-------------------
 requirements.txt |  104 +--
 2 files changed, 1142 insertions(+), 817 deletions(-)

diff --git a/Pipfile.lock b/Pipfile.lock
index 20ece82..be60c73 100644
--- a/Pipfile.lock
+++ b/Pipfile.lock
@@ -18,9 +18,10 @@
     "default": {
         "antimony": {
             "hashes": [
-                "sha256:0991771f587b207f0c18f3b6e33cbea40d78a6659be3f4cad4cb1326ab6ca54f"
+                "sha256:26d425612580c4494386a0361cc886c471f33f274a8e13d10d95a7a1dd060cf7",
+                "sha256:85a6a3ee895fa60447ad8f25db2b3ce22d65e2e08b8e304916870fe672fcbc70"
             ],
-            "version": "==2.12.0.3"
+            "version": "==2.12.0.2"
         },
         "appdirs": {
             "hashes": [
@@ -31,10 +32,11 @@
         },
         "attrs": {
             "hashes": [
-                "sha256:31b2eced602aa8423c2aea9c76a724617ed67cf9513173fd3a4f03e3a929c7e6",
-                "sha256:832aa3cde19744e49938b91fea06d69ecb9e649c93ba974535d08ad92164f700"
+                "sha256:2d27e3784d7a565d36ab851fe94887c5eccd6a463168875832a1be79c82828b4",
+                "sha256:626ba8234211db98e869df76230a137c4c40a12d72445c45d5f5b716f076e2fd"
             ],
-            "version": "==20.3.0"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==21.4.0"
         },
         "backcall": {
             "hashes": [
@@ -52,17 +54,18 @@
         },
         "certifi": {
             "hashes": [
-                "sha256:1a4995114262bffbc2413b159f2a1a480c969de6e6eb13ee966d470af86af59c",
-                "sha256:719a74fb9e33b9bd44cc7f3a8d94bc35e4049deebe19ba7d8e108280cfd59830"
+                "sha256:78884e7c1d4b00ce3cea67b44566851c4343c120abd683433ce934a68ea58872",
+                "sha256:d62a0163eb4c2344ac042ab2bdf75399a71a2d8c7d47eac2e2ee91b9d6339569"
             ],
-            "version": "==2020.12.5"
+            "version": "==2021.10.8"
         },
-        "chardet": {
+        "charset-normalizer": {
             "hashes": [
-                "sha256:0d6f53a15db4120f2b08c94f11e7d93d2c911ee118b6b30a04ec3ee8310179fa",
-                "sha256:f864054d66fd9118f2e67044ac8981a54775ec5b67aed0441892edb553d21da5"
+                "sha256:876d180e9d7432c5d1dfd4c5d26b72f099d503e8fcc0feb7532c9289be60fcbd",
+                "sha256:cb957888737fc0bbcd78e3df769addb41fd1ff8cf950dc9e7ad7793f1bf44455"
             ],
-            "version": "==4.0.0"
+            "markers": "python_version >= '3'",
+            "version": "==2.0.10"
         },
         "click": {
             "hashes": [
@@ -74,68 +77,95 @@
         },
         "cycler": {
             "hashes": [
-                "sha256:1d8a5ae1ff6c5cf9b93e8811e581232ad8920aeec647c37316ceac982b08cb2d",
-                "sha256:cd7b2d1018258d7247a71425e9f26463dfb444d411c39569972f4ce586b0c9d8"
+                "sha256:3a27e95f763a428a739d2add979fa7494c912a32c17c4c38c4d5f082cad165a3",
+                "sha256:9c87405839a19696e837b3b818fed3f5f69f16f1eec1a1ad77e043dcea9c772f"
             ],
-            "version": "==0.10.0"
+            "markers": "python_version >= '3.6'",
+            "version": "==0.11.0"
         },
         "cython": {
             "hashes": [
-                "sha256:105d813eedf276588a02a240ece2f7bca8235aee9bb48e25293410c3c1ac7230",
-                "sha256:15b2ba47858d7949a036d4ba6e838120bf3c06983769e99d12867a2c8cd0cd91",
-                "sha256:182e78d75515e3d50f31cfde501fbf2af7ee0698e8149f41048db5d3c98ffc8f",
-                "sha256:3ce10572a6b7fd5baa755f11cdf09830ae518e6f837aa38c31ec534b1f874fd4",
-                "sha256:40a87c9ecd0b1b485804c70b16427e88bd07bff9f270d022d872869ff4d6ac6e",
-                "sha256:59c950513c485f1e8da0e04a2a91f71508c5e98b6912ce66588c6aee72d8e4d1",
-                "sha256:5cc5e72a106d7abc12b6e58883c914bce0b2031df6035014094a15593052db12",
-                "sha256:6609babc68d37bb92a1b85ebd867405f720aeb2a6af946f6bd7f71b22dbb91cf",
-                "sha256:667b169c89c4b8eb79d35822508ed8d77b9421af085142fad20bfef775a295d2",
-                "sha256:7265abb33f154663a052c47213b978ec703f89a938bca38f425f25d4e8ba2211",
-                "sha256:761b965b5abcea072ba642dbb740e44532bc88618f34b605c05de1d6088b1cdd",
-                "sha256:88bebb8803adac0b64426fd261752925e8bf301b1986078e9506670bcbb5307f",
-                "sha256:92c028e0d4ac9e32b2cf6c970f7f6c5c3aaa87f011798201ef56746705a8f01a",
-                "sha256:97511722515b66851d3f77d64b1970a97e5114c4007efd5a0a307936e156a24c",
-                "sha256:a6f5bf7fece95dd62ba13a9edb7d3ecc1a9097e6f0fde78c5fad763163157472",
-                "sha256:a8aee32da407f215652959fc6568277cfd35a24714a5238c8a9778bf34d91ace",
-                "sha256:ab4c34d8693a62f1b8261a131784a3db397ceaa03ea90a5799574623acaa2c2c",
-                "sha256:af646d37e23fc3ba217c587096fac4e57006d8173d2a2365763287071e0eec2d",
-                "sha256:b53c9d7b545c70f462408000affdd330cb87d05f83a58a9ccd72d19c8df80d56",
-                "sha256:ba7f34e07ca0d1ce4ba8d9e3da6d2eb0b1ac6cb9896d2c821b28a9ac9504bcfe",
-                "sha256:bbc48be45ee9eba2d0268bf616220cfb46d998ad85524f3cf752d55eb6dd3379",
-                "sha256:c4f2c8cceffd8403468b542570826174564fe2c6549dd199a75c13720add4981",
-                "sha256:d73a4851d1dbdcc70e619ccb104877d5e523d0fc5aef6fb6fbba4344c1f60cae",
-                "sha256:d76feb00f754d86e6d48f39b59a4e9a8fcfed1e6e3e433d18e3677ff19ff2911",
-                "sha256:dc42b78b62815abea19a37d186011cca57f72ec509f56fa6c43a71b2e8c6a24f",
-                "sha256:df6b83c7a6d1d967ea89a2903e4a931377634a297459652e4551734c48195406",
-                "sha256:e8c84ad389b3f36433e1be88dd7a1e36db4ab5b4848f5899cbd0a1cdc443b925",
-                "sha256:f5f57b2e13cc3aa95526145ffa551df529f04bf5d137c59350e7accff9362dc0",
-                "sha256:f7064df99094b4fd09c9ebcca6c94a652fac04c7dce514a4f2ab6ce23fcd0ba4",
-                "sha256:f89c19480d137026f04a34cbd54ab0fb328b29005c91d3a36d06b9c4710152c1",
-                "sha256:fedecbd2ad6535e30dd3b43ca9b493a1930d5167257a3fb60687bd425f6fdc54"
-            ],
-            "version": "==0.29.22"
+                "sha256:0205b685802eb4c039b14f67b7ac3f00c55ff04b9e3871df2249576d3e59ba42",
+                "sha256:0c3093bc99facfc97e5019f6c5bc39987663792265c1334d9fc9e37c3a3dcd6f",
+                "sha256:0ffce25bf50fa926ec6bf8d6f29650e7cb33fae445938c9880e1ce9b776353ef",
+                "sha256:10402f0f1564ffc6ecb9c45e07f995771d05bb0b0e1d151e40574638292ee3a5",
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+                "sha256:362fbb9cb4627c7786231429768b54aaba5459a2a0e46c25e59f202ca6155437",
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+                "sha256:d83dad8dc6c63706cb3178dc79010b3865b1345090727189d2cd61758a825ee8",
+                "sha256:e118525defec3f67471d8ee5ce04340d43195410a87e5d7ec8a1a9e953c0066a",
+                "sha256:ebe32e002a9e6553de399033e259ece72aa17c77f740b265e66f122572a8a278",
+                "sha256:ed76fb98979f02b5e89079906071983a36f3634d3028b86f935cf0196f24fcaa",
+                "sha256:f5e15ff892c8afad64931ee3dd723c4755c2c516606f9aae7613bebfac62b0f6",
+                "sha256:fec66cd0a48697fab903854566235aecf1084f62e3163d6589ae7335a1b4d448"
+            ],
+            "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'",
+            "version": "==0.29.26"
         },
         "decorator": {
             "hashes": [
-                "sha256:41fa54c2a0cc4ba648be4fd43cff00aedf5b9465c9bf18d64325bc225f08f760",
-                "sha256:e3a62f0520172440ca0dcc823749319382e377f37f140a0b99ef45fecb84bfe7"
+                "sha256:637996211036b6385ef91435e4fae22989472f9d571faba8927ba8253acbc330",
+                "sha256:b8c3f85900b9dc423225913c5aace94729fe1fa9763b38939a95226f02d37186"
+            ],
+            "markers": "python_version >= '3.5'",
+            "version": "==5.1.1"
+        },
+        "entrypoints": {
+            "hashes": [
+                "sha256:589f874b313739ad35be6e0cd7efde2a4e9b6fea91edcc34e58ecbb8dbe56d19",
+                "sha256:c70dd71abe5a8c85e55e12c19bd91ccfeec11a6e99044204511f9ed547d48451"
             ],
-            "version": "==4.4.2"
+            "markers": "python_version >= '2.7'",
+            "version": "==0.3"
         },
         "idna": {
             "hashes": [
-                "sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6",
-                "sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0"
+                "sha256:84d9dd047ffa80596e0f246e2eab0b391788b0503584e8945f2368256d2735ff",
+                "sha256:9d643ff0a55b762d5cdb124b8eaa99c66322e2157b69160bc32796e824360e6d"
             ],
-            "version": "==2.10"
+            "markers": "python_version >= '3'",
+            "version": "==3.3"
         },
         "importlib-metadata": {
             "hashes": [
-                "sha256:742add720a20d0467df2f444ae41704000f50e1234f46174b51f9c6031a1bd71",
-                "sha256:b74159469b464a99cb8cc3e21973e4d96e05d3024d337313fedb618a6e86e6f4"
+                "sha256:65a9576a5b2d58ca44d133c42a241905cc45e34d2c06fd5ba2bafa221e5d7b5e",
+                "sha256:766abffff765960fcc18003801f7044eb6755ffae4521c8e8ce8e83b9c9b0668"
             ],
             "markers": "python_version < '3.8'",
-            "version": "==3.7.3"
+            "version": "==4.8.3"
         },
         "iniconfig": {
             "hashes": [
@@ -146,17 +176,19 @@
         },
         "ipykernel": {
             "hashes": [
-                "sha256:98321abefdf0505fb3dc7601f60fc4087364d394bd8fad53107eb1adee9ff475",
-                "sha256:efd07253b54d84d26e0878d268c8c3a41582a18750da633c2febfd2ece0d467d"
+                "sha256:4ea44b90ae1f7c38987ad58ea0809562a17c2695a0499644326f334aecd369ec",
+                "sha256:66f824af1ef4650e1e2f6c42e1423074321440ef79ca3651a6cfd06a4e25e42f"
             ],
-            "version": "==5.5.0"
+            "markers": "python_version >= '3.5'",
+            "version": "==5.5.6"
         },
         "ipython": {
             "hashes": [
-                "sha256:2dbcc8c27ca7d3cfe4fcdff7f45b27f9a8d3edfa70ff8024a71c7a8eb5f09d64",
-                "sha256:9f4fcb31d3b2c533333893b9172264e4821c1ac91839500f31bd43f2c59b3ccf"
+                "sha256:5ac47dc9af66fc2f5530c12069390877ae372ac905edca75a92a6e363b5d7caa",
+                "sha256:c0427ed8bc33ac481faf9d3acf7e84e0010cdaada945e0badd1e2e74cc075833"
             ],
-            "version": "==7.16.1"
+            "markers": "python_version >= '3.6'",
+            "version": "==7.16.3"
         },
         "ipython-genutils": {
             "hashes": [
@@ -167,31 +199,35 @@
         },
         "jedi": {
             "hashes": [
-                "sha256:18456d83f65f400ab0c2d3319e48520420ef43b23a086fdc05dff34132f0fb93",
-                "sha256:92550a404bad8afed881a137ec9a461fed49eca661414be45059329614ed0707"
+                "sha256:86ed7d9b750603e4ba582ea8edc678657fb4007894a12bcf6f4bb97892f31d20",
+                "sha256:98cc583fa0f2f8304968199b01b6b4b94f469a1f4a74c1560506ca2a211378b5"
             ],
-            "version": "==0.18.0"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==0.17.2"
         },
         "jinja2": {
             "hashes": [
-                "sha256:03e47ad063331dd6a3f04a43eddca8a966a26ba0c5b7207a9a9e4e08f1b29419",
-                "sha256:a6d58433de0ae800347cab1fa3043cebbabe8baa9d29e668f1c768cb87a333c6"
+                "sha256:077ce6014f7b40d03b47d1f1ca4b0fc8328a692bd284016f806ed0eaca390ad8",
+                "sha256:611bb273cd68f3b993fabdc4064fc858c5b47a973cb5aa7999ec1ba405c87cd7"
             ],
-            "version": "==2.11.3"
+            "markers": "python_version >= '3.6'",
+            "version": "==3.0.3"
         },
         "jupyter-client": {
             "hashes": [
-                "sha256:c4bca1d0846186ca8be97f4d2fa6d2bae889cce4892a167ffa1ba6bd1f73e782",
-                "sha256:e053a2c44b6fa597feebe2b3ecb5eea3e03d1d91cc94351a52931ee1426aecfc"
+                "sha256:540ca35e57e83c5ece81abd9b781a57cba39a37c60a2a30c8c1b2f6663544343",
+                "sha256:f0c576cce235c727e30b0a0da88c2755d0947d0070fa1bc45f195079ffd64e66"
             ],
-            "version": "==6.1.12"
+            "markers": "python_full_version >= '3.6.1'",
+            "version": "==7.1.1"
         },
         "jupyter-core": {
             "hashes": [
-                "sha256:79025cb3225efcd36847d0840f3fc672c0abd7afd0de83ba8a1d3837619122b4",
-                "sha256:8c6c0cac5c1b563622ad49321d5ec47017bd18b94facb381c6973a0486395f8e"
+                "sha256:1c091f3bbefd6f2a8782f2c1db662ca8478ac240e962ae2c66f0b87c818154ea",
+                "sha256:dce8a7499da5a53ae3afd5a9f4b02e5df1d57250cf48f3ad79da23b4778cd6fa"
             ],
-            "version": "==4.7.1"
+            "markers": "python_version >= '3.6'",
+            "version": "==4.9.1"
         },
         "kiwisolver": {
             "hashes": [
@@ -199,6 +235,7 @@
                 "sha256:1e1bc12fb773a7b2ffdeb8380609f4f8064777877b2225dec3da711b421fda31",
                 "sha256:225e2e18f271e0ed8157d7f4518ffbf99b9450fca398d561eb5c4a87d0986dd9",
                 "sha256:232c9e11fd7ac3a470d65cd67e4359eee155ec57e822e5220322d7b2ac84fbf0",
+                "sha256:24cc411232d14c8abafbd0dddb83e1a4f54d77770b53db72edcfe1d611b3bf11",
                 "sha256:31dfd2ac56edc0ff9ac295193eeaea1c0c923c0355bf948fbd99ed6018010b72",
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                 "sha256:401a2e9afa8588589775fe34fc22d918ae839aaaf0c0e96441c0fdbce6d8ebe6",
@@ -209,8 +246,10 @@
                 "sha256:5a7a7dbff17e66fac9142ae2ecafb719393aaee6a3768c9de2fd425c63b53e21",
                 "sha256:5c3e6455341008a054cccee8c5d24481bcfe1acdbc9add30aa95798e95c65621",
                 "sha256:5f6ccd3dd0b9739edcf407514016108e2280769c73a85b9e59aa390046dbf08b",
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                 "sha256:72c99e39d005b793fb7d3d4e660aed6b6281b502e8c1eaf8ee8346023c8e03bc",
                 "sha256:78751b33595f7f9511952e7e60ce858c6d64db2e062afb325985ddbd34b5c131",
+                "sha256:792e69140828babe9649de583e1a03a0f2ff39918a71782c76b3c683a67c6dfd",
                 "sha256:834ee27348c4aefc20b479335fd422a2c69db55f7d9ab61721ac8cd83eb78882",
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                 "sha256:950a199911a8d94683a6b10321f9345d5a3a8433ec58b217ace979e18f16e248",
@@ -225,9 +264,12 @@
                 "sha256:ca3820eb7f7faf7f0aa88de0e54681bddcb46e485beb844fcecbcd1c8bd01689",
                 "sha256:cf8b574c7b9aa060c62116d4181f3a1a4e821b2ec5cbfe3775809474113748d4",
                 "sha256:d3155d828dec1d43283bd24d3d3e0d9c7c350cdfcc0bd06c0ad1209c1bbc36d0",
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                 "sha256:f8d6f8db88049a699817fd9178782867bf22283e3813064302ac59f61d95be05",
                 "sha256:fd34fbbfbc40628200730bc1febe30631347103fc8d3d4fa012c21ab9c11eca9"
             ],
+            "markers": "python_version >= '3.6'",
             "version": "==1.3.1"
         },
         "libroadrunner": {
@@ -249,60 +291,78 @@
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-            "version": "==1.1.1"
+            "markers": "python_version >= '3.6'",
+            "version": "==2.0.1"
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         "matplotlib": {
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@@ -332,8 +392,17 @@
                 "sha256:ed4a9e6dcacba56b17a0a9ac22ae2c72a35b7f0ef0693aa68574f0b2df607a89",
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             "version": "==3.3.4"
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+        "nest-asyncio": {
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+            "version": "==1.5.4"
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@@ -371,14 +440,16 @@
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             "version": "==1.19.3"
         },
         "packaging": {
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-            "version": "==20.9"
+            "markers": "python_version >= '3.6'",
+            "version": "==21.3"
         },
         "pandas": {
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@@ -407,14 +478,16 @@
                 "sha256:edda9bacc3843dfbeebaf7a701763e68e741b08fccb889c003b0a52f0ee95782",
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             "version": "==1.1.5"
         },
         "parso": {
             "hashes": [
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@@ -786,6 +891,7 @@
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@@ -796,12 +902,21 @@
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@@ -810,11 +925,20 @@
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@@ -861,6 +985,7 @@
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@@ -872,19 +997,19 @@
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@@ -895,10 +1020,11 @@
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@@ -911,32 +1037,45 @@
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@@ -1032,40 +1188,52 @@
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@@ -1328,65 +1537,74 @@
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@@ -1403,12 +1621,21 @@
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@@ -1420,17 +1647,19 @@
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@@ -1444,28 +1673,31 @@
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@@ -1477,23 +1709,46 @@
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+                "sha256:47af81df5d575e36d4be9396db94f35c8f62de3077a405f9af94f9756255cef5",
+                "sha256:4f35dcf6d2a67e913a7135809006bd000d55ad5b5834b5dbe5b82dcf8db1ac05",
+                "sha256:5d1083a0dcb39b43cfcd948f09e480c23eb4af66d7d08f6b36951f4c629c3bd1",
+                "sha256:6df94e675b05ecf4e7a57883a73b916ffcb5872d7b1298ac5cef8ac1cbce73c6",
+                "sha256:7a318df321d7adc3de876b29640cca8de1ad4d4e4fe7c4a76d64d9d6f1676304",
+                "sha256:7b0a63865ec2978ebafb0906bf982eb52bea26fc98e2ae5e59b9d204afe2d762",
+                "sha256:843fd8b3246b2b20bbae48b2334d26507c9531b2b014533adfc6132e3ec8e60c",
+                "sha256:85f28c38952b8a94183ab15ec6c6e89c117d00ceeae5d754ef1a33e01e28b845",
+                "sha256:8a0d9dde58937976cd06cd776411b77b0e5d38db0a3c1be28ee8bb428ff5a42b",
+                "sha256:9baa160ba1d3f712a356e77718251c9d9eee43ed548debdcc9d75b06a75b3e82",
+                "sha256:9c5330692122b999997911252466a7d17e4e428d7d9a8db0b99ba81b8b9c010c",
+                "sha256:9f4a34386785a33600ac7442fec34c3d8b2d7e5309cfc94bc7c9ba93f12640c2",
+                "sha256:a6c32356145d95a0403b5895d60c36798a48af13b8863e43ad7457a0361afad0",
+                "sha256:b0b9cde57eebaac26de040f8ebf0541e06fe9bcf7e42872dc036d2ced7d99ccf",
+                "sha256:b0e9510e867c72a87db2d16377c2bef912f29afd8381d1fdae332b9b7f697efa",
+                "sha256:b270088e472f1d65a0a0aab3190010b9ac1a5b2969d39bf2b53c0fbf339bc87a",
+                "sha256:b72fadeea5727204674c9f77166da7feaafdf70f1ed50bb15bf321f7c39c7194",
+                "sha256:b80a35bad8fad1772f992bae8086b0cde788cd3b37f35d0d4506c93e6edad645",
+                "sha256:b850029d64008e970cae04ada69aa33e1cd412106a1efde221269c1cda1b40cc",
+                "sha256:baee56eca35cb5fbe02c28bd9c0936be41a96fa5c0812d9d4b7edeb5c3d568a0",
+                "sha256:bf199015910fcfa19b6e12881abeb462498791b2ab0111ff8b17095d0477e9d4",
+                "sha256:d8e2a52fbeee55db306b9306892f5cde7e78c56069c1212abf176d1886fff60a",
+                "sha256:de42986e2602b6a0baca452ff50e9cbe66faf256761295d5d07ae3f6757b487d",
+                "sha256:df481d4e13ca34d870d1fdf387742867edff3f78a1eea1bbcd72ea2fa68d9a6e",
+                "sha256:e46c1462761db518fae51ab0d89a6256aeac148a795f7244d9084c459b477af5",
+                "sha256:e7e73ec5ba1b42c2027773f69b70eff28df132907aa98b28166c39d3ea45e85b",
+                "sha256:f158fdb08e022f2f16f0fba317a80558b0cebc7e2c84ae783e5f75616d5c90d5",
+                "sha256:fc9a508efb829bf0542be9b2578d8da08f0ab1fa712e086ebb777d6ec9e6d8d2",
+                "sha256:fd0901db652a58f46550074596227dbddb7a02d2de744d3cd2358101f78037bb"
+            ],
+            "markers": "python_version >= '3.1'",
+            "version": "==4.3.0"
         },
         "virtualenv": {
             "hashes": [
-                "sha256:49ec4eb4c224c6f7dd81bb6d0a28a09ecae5894f4e593c89b0db0885f565a107",
-                "sha256:83f95875d382c7abafe06bd2a4cdd1b363e1bb77e02f155ebe8ac082a916b37c"
+                "sha256:339f16c4a86b44240ba7223d0f93a7887c3ca04b5f9c8129da7958447d079b09",
+                "sha256:d8458cf8d59d0ea495ad9b34c2599487f8a7772d796f9910858376d1600dd2dd"
             ],
-            "version": "==20.4.3"
+            "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'",
+            "version": "==20.13.0"
         },
         "wcwidth": {
             "hashes": [
@@ -1778,10 +2092,10 @@
         },
         "widgetsnbextension": {
             "hashes": [
-                "sha256:079f87d87270bce047512400efd70238820751a11d2d8cb137a5a5bdbaf255c7",
-                "sha256:bd314f8ceb488571a5ffea6cc5b9fc6cba0adaf88a9d2386b93a489751938bcd"
+                "sha256:763a9fdc836d141fa080005a886d63f66f73d56dba1fb5961afc239c77708569",
+                "sha256:e0731a60ba540cd19bbbefe771a9076dcd2dde90713a8f87f27f53f2d1db7727"
             ],
-            "version": "==3.5.1"
+            "version": "==3.5.2"
         },
         "wrapt": {
             "hashes": [
@@ -1791,10 +2105,11 @@
         },
         "zipp": {
             "hashes": [
-                "sha256:3607921face881ba3e026887d8150cca609d517579abe052ac81fc5aeffdbd76",
-                "sha256:51cb66cc54621609dd593d1787f286ee42a5c0adbb4b29abea5a63edc3e03098"
+                "sha256:71c644c5369f4a6e07636f0aa966270449561fcea2e3d6747b8d23efaa9d7832",
+                "sha256:9fe5ea21568a0a70e50f273397638d39b03353731e6cbbb3fd8502a33fec40bc"
             ],
-            "version": "==3.4.1"
+            "markers": "python_version >= '3.6'",
+            "version": "==3.6.0"
         }
     }
 }
diff --git a/requirements.txt b/requirements.txt
index 63a2770..2fb31c5 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,64 +1,74 @@
+#
+# These requirements were autogenerated by pipenv
+# To regenerate from the project's Pipfile, run:
+#
+#    pipenv lock --requirements
+#
+
 -i https://pypi.org/simple/
-antimony==2.12.0.3
+antimony==2.12.0.2
 appdirs==1.4.4
-attrs==20.3.0
+attrs==21.4.0; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'
 backcall==0.2.0
 cayenne==1.0.3
-certifi==2020.12.5
-chardet==4.0.0
+certifi==2021.10.8
+charset-normalizer==2.0.10; python_version >= '3'
 click==7.1.2
-cycler==0.10.0
-cython==0.29.22
-decorator==4.4.2
-idna==2.10
-importlib-metadata==3.7.3 ; python_version < '3.8'
+cycler==0.11.0; python_version >= '3.6'
+cython==0.29.26; python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'
+decorator==5.1.1; python_version >= '3.5'
+entrypoints==0.3; python_version >= '2.7'
+idna==3.3; python_version >= '3'
+importlib-metadata==4.8.3; python_version < '3.8'
 iniconfig==1.1.1
-ipykernel==5.5.0
+ipykernel==5.5.6; python_version >= '3.5'
 ipython-genutils==0.2.0
-ipython==7.16.1
-jedi==0.18.0
-jinja2==2.11.3
-jupyter-client==6.1.12
-jupyter-core==4.7.1
-kiwisolver==1.3.1
+ipython==7.16.3; python_version >= '3.6'
+jedi==0.17.2; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'
+jinja2==3.0.3; python_version >= '3.6'
+jupyter-client==7.1.1; python_full_version >= '3.6.1'
+jupyter-core==4.9.1; python_version >= '3.6'
+kiwisolver==1.3.1; python_version >= '3.6'
 libroadrunner==2.0.5
-markupsafe==1.1.1
-matplotlib==3.3.4
-numpy==1.19.3
-packaging==20.9
-pandas==1.1.5
-parso==0.8.1
-pexpect==4.8.0 ; sys_platform != 'win32'
+markupsafe==2.0.1; python_version >= '3.6'
+matplotlib==3.3.4; python_version >= '3.6'
+nest-asyncio==1.5.4; python_version >= '3.5'
+numpy==1.19.3; python_version >= '3.6'
+packaging==21.3; python_version >= '3.6'
+pandas==1.1.5; python_full_version >= '3.6.1'
+parso==0.7.1; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'
+pexpect==4.8.0; sys_platform != 'win32'
 phrasedml==1.1.1
 pickleshare==0.7.5
-pillow==8.1.1
-plotly==4.14.3
-pluggy==0.13.1
-prompt-toolkit==3.0.17
+pillow==8.4.0; python_version >= '3.6'
+plotly==5.5.0; python_version >= '3.6'
+pluggy==1.0.0; python_version >= '3.6'
+prompt-toolkit==3.0.24; python_full_version >= '3.6.2'
 ptyprocess==0.7.0
-py==1.10.0
-pygments==2.8.1
-pyparsing==2.4.7
-pytest==6.2.2
-python-dateutil==2.8.1
-python-libcombine==0.2.10
-python-libnuml==1.1.3
-python-libsbml==5.19.0
-python-libsedml==2.0.15
-pytz==2021.1
-pyzmq==22.0.3
-requests==2.25.1
-retrying==1.3.3
+py==1.11.0; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'
+pygments==2.11.2; python_version >= '3.5'
+pyparsing==3.0.7; python_version >= '3.6'
+pytest==6.2.5; python_version >= '3.6'
+python-dateutil==2.8.2; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'
+python-libcombine==0.2.15
+python-libnuml==1.1.4
+python-libsbml==5.19.2
+python-libsedml==2.0.26
+pytz==2021.3
+pyzmq==22.3.0; python_version >= '3.6'
+requests==2.27.1; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4, 3.5'
 rrplugins==2.0.5
 sbml2matlab==1.2.3.1
-scipy==1.5.4
+scipy==1.5.4; python_version >= '3.6'
 seaborn==0.11.1
-six==1.15.0
+setuptools==59.6.0; python_version >= '3.6'
+six==1.16.0; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'
 tellurium==2.2.0
-toml==0.10.2
-tornado==6.1
+tenacity==8.0.1; python_version >= '3.6'
+toml==0.10.2; python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'
+tornado==6.1; python_version >= '3.5'
 traitlets==4.3.3
-typing-extensions==3.7.4.3 ; python_version < '3.8'
-urllib3==1.26.4
+typing-extensions==4.0.1; python_version < '3.8'
+urllib3==1.26.8; python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4' and python_version < '4'
 wcwidth==0.2.5
-zipp==3.4.1
+zipp==3.6.0; python_version >= '3.6'