From 0f6c13a93721556d835509650f3f4b1463b75f8d Mon Sep 17 00:00:00 2001
From: Samuel Lampa <samuel.lampa@gmail.com>
Date: Mon, 23 May 2016 15:59:22 +0200
Subject: [PATCH] Fix #88 in orig repo about creating recursive symlink for
 .fai file

---
 tools/samtools-faidx.cwl | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tools/samtools-faidx.cwl b/tools/samtools-faidx.cwl
index cafe42669..62d2ad5f7 100755
--- a/tools/samtools-faidx.cwl
+++ b/tools/samtools-faidx.cwl
@@ -31,7 +31,7 @@ outputs:
 - id: "#index"
   type: File
   outputBinding:
-    glob: $(inputs.input.path.split('/').slice(-1)[0]) #+'.fai')
+    glob: $(inputs.input.path.split('/').slice(-1)[0] +'.fai')
   secondaryFiles:
   - .fai
   - .gzi