rst created

Author: JD2112

.DS_Store

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+Image acquisition from live cell image instrument (IncuCyte®) and processed in MATLAB to acquire desired frames and export into a video format.
+===============================================================================================================================================
+
+Reuired files
+-------------
+
+1. Sequential images from the IncuCyte® should be in the local folder
+
+Run the code
+------------
+
+::
+
+   1. open the code file (mcode.m) in MATLAB
+   2. Run it in MATLAB console
+   3. The code will prompt to select the folder (where you saved the images)
+   4. DONE!
+
+Movie 1 🎬
+---------
+
+Video with MATLAB processing inset only |Watch the Video|
+
+.. |Watch the Video| image:: vertopal_3138ad45283a40f6ba8e003fc947aa77/2f3d4ba425f6944ae001f61bda86485609c8a76e.jpg
+   :target: https://youtu.be/pOvcgVS5NNs
+
+Movie 2 🎬
+---------
+
+Video with insets of MATLAB processing and Growth Curves |Wathc the
+Video|
+
+.. |Wathc the Video| image:: vertopal_3138ad45283a40f6ba8e003fc947aa77/2daa35ea5d93fa957772d211882f9f3fc5531f89.jpg
+   :target: https://youtu.be/bpEqelEDgXk
+
+Citation:
+---------
+
+\**Kalsum, S., Andersson, B., Das, J. et al. A high-throughput screening
+assay based on automated microscopy for monitoring antibiotic
+susceptibility of *Mycobacterium tuberculosis* phenotypes. BMC Microbiol
+21, 167 (2021). Find full article
+`here <https://doi.org/10.1186/s12866-021-02212-3>`__
+
+
+